Arvicanthis niloticus (African grass rat): 117704082
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Entry
117704082 CDS
T08817
Symbol
Poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03410
Base excision repair
anu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117704082 (Poll)
03450 Non-homologous end-joining
117704082 (Poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117704082 (Poll)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117704082 (Poll)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117704082 (Poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117704082 (Poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
NTP_transf_2
HHH_5
HHH
PTCB-BRCT
PAG
Motif
Other DBs
NCBI-GeneID:
117704082
NCBI-ProteinID:
XP_034351963
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Position
1:complement(151952727..151960340)
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AA seq
573 aa
AA seq
DB search
MDPQGILKAFPKRKKIHADPSSKALAKIPRREAREAGGWLGSLRAHIMPTGIGRARAELF
EKQIIQHGGQVCPAQAPGVTHIVVDEGMDYERALRLLKLPQLPPGAQLVKSAWLSLCLQE
GTLADTDGFSLSIPNRSLDEPEPSKSGQDAPAPGTQGVLPRTTLSLSPPHTRAISPPPKA
EKPPRTQAQLSSEDEASDGEEPQVSSADLQALITGHYPAPPEEDGGPDPAPKALDKWVCA
QPSSQKATNYNLHITEKLEVLAKAYTVQGDKWRALGYAKAINALKSFHKPVSSYQEACSI
PGIGKRMAEKVMEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRNLDD
VRSLGSLTAQQAIGLKHYDDFLDRMPREEAAEIEQTVRISAQAFNPGLLCVACGSYRRGK
MTCGDVDVLITHPDGRSHQGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGA
GQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQG
IKVGPGQVLPTPTEKDVFKLLGLPYREPAERDW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagggcatcttgaaggcatttcccaagcgaaagaaaattcatgcagatcca
tcatcaaaagcacttgcaaagattcccagaagggaggcgagagaagctggaggctggctg
ggctccctgagggcccacattatgcccactggcattggacgagcccgggctgaactcttt
gagaagcagattattcagcatggcggccaggtgtgccctgcccaggccccaggagtcact
cacattgtggtggatgaaggcatggactatgaacgggctctccggctcctcaagctgccc
cagctaccccctggtgctcagctggtgaagtcagcctggctgagcctgtgcctgcaggag
ggaacactggcagacacagacggattcagcctttccattcccaacaggtccttggacgaa
ccagagcccagcaagtcaggccaagatgctcctgctcctggcacccaaggggttctaccc
aggacaaccctctctctttcccctcctcacaccagagctatatctcctcccccaaaggca
gaaaagccaccaagaacccaagcccagctcagctcagaggatgaagccagcgatggggaa
gagccccaggttagctcagcagatctgcaagccttgatcactgggcactaccccgctccc
cctgaggaagatggtgggcctgacccagccccaaaagctctggataagtgggtctgtgca
cagccctcgagccagaaggcaaccaactacaacctgcacatcacagagaagctggaagtg
ttggctaaagcctacaccgtccagggagacaagtggagggccctgggctatgccaaggct
atcaatgccctcaagagcttccacaagcctgtcagctcctaccaggaggcctgtagcatc
ccaggaattggcaagcggatggcagagaaggtcatggagatcctggagagtgggcatctg
cggaagctagaccacatcagtgacagtgtgccagtcttggagctcttctccaacatctgg
ggagctgggacgaagactgcccagatgtggtaccatcagggcttccgaaacctagacgat
gtccgaagcctgggctccctgaccgctcagcaggccattggcttgaagcactacgatgac
ttcctggaccgcatgcccagggaggaggctgcagagattgagcagacggtccggatatca
gcccaggccttcaaccctgggctgctgtgtgtggcctgtggctcttaccgccgggggaag
atgacctgcggggatgtggacgtgctcattactcaccccgatggccggtcccaccagggc
atcttcagccgcctccttgacagccttcggcagcaagggttcctcacagatgacttggtg
agccaggaggagaatggccagcagcagaagtacctgggtgtgtgccggctcccaggggcc
ggccagcgccaccggcgactggacatcatcgtggtgccctacagcgagtttgcctgtgcc
ctgctctacttcactgggtctgcccacttcaaccggtccatgagagctctggccaagacc
aagggcatgagcctgtcggaacatgcccttagtgcagctgtggtccggaacagccaaggc
atcaaggtggggcctggacaggtgctgcccacccccacagagaaggacgtcttcaagctc
ttaggcctgccctaccgagagcccgctgaacgggactggtga
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integrated database retrieval system
