Arvicanthis niloticus (African grass rat): 117704098
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Entry
117704098 CDS
T08817
Symbol
Trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein isoform X1
KO
K11796
Trpc4-associated protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117704098 (Trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117704098 (Trpc4ap)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117704098 (Trpc4ap)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117704098 (Trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Carm_PH
Motif
Other DBs
NCBI-GeneID:
117704098
NCBI-ProteinID:
XP_034351980
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Position
2:complement(125033919..125102776)
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AA seq
797 aa
AA seq
DB search
MAAAPAAAGAGASRGRRSAATAAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
FLTERDKLSKWSGIPQLLLKLYATSHLHSDFVECQNILKEISPLLSMEAMAFVTEDRKFT
QEATYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQASTVFPPLAT
SEESGLPHSSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
SYIEEPYMDIDRDFTEE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgccggcagcggctggagctggggccagccgggggaggcggtcggcagcg
accgcggcggcttggggcggctggggaggtcggccgaggccgggtaacatcctgctgcag
ctgcggcagggccagctcaccggccgaggcctggttcgggcggtgcagttcactgagacc
tttttgacggagagagacaaattgtccaaatggagtggaattcctcagttgctccttaag
ctgtatgccaccagccatctgcacagtgacttcgttgagtgccaaaacattctcaaggag
atttctcctcttctctctatggaggctatggcgtttgtaactgaagacaggaaatttact
caagaagctacatatccaaatacatatatttttgacttatttggaggtgtggatcttctt
gtagaaattcttatgaggcctaccatctctatccggggacagaaactaaaaataagtgat
gagatgtcgaaggactgcttgagcatcctgtataatacctgtgtctgtacggaaggagta
acaaagcgtttggcagaaaagaatgactttgtgatttttctgttcacactgatgacaagt
aagaagacgttcttacaaacagcaactctcattgaagacattttgggtgttaagaaggaa
atgattcggctagatgaagttcccaatctgagttccttagtatccaatttcgatcagcag
cagcttgctaacttctgcaggatcctggctgtcaccatttcagagatggacacagggaat
gacgacaagcacacacttcttgccaaaaatgctcagcagaagaaaagcttgagtttgggg
ccttctgcagctgaaatcaaccaagctgctcttctcagcatccctggctttgtggaacgg
ctttgcaaactggcaactagaaaagtgtcagagtcaacgggcacagccagcttccttcag
gaattggaggagtggtacacatggctagacaacgcgctggtgctagatgctctgatgcga
gtggccaacgaggagtctgaacacaatcaagcctccactgtgttccctcctctagccact
tcggaggagagcggcctgccacacagctcagccaggacccagctgccccagtcaatgaag
attatgcatgagattatgtacaagctggaagtgctttatgtcctttgcgtgctgctgatg
gggcgtcagcggaaccaggtccacaggatgattgctgagttcaagttgatcccaggactc
aacaatttgtttgacaaactgatttggaggaagcattcagcatctgccctcgtcctccat
ggtcacaaccagaactgtgactgtagcccggacatcaccttgaagatccagtttttgaga
cttctccagagtttcagtgaccaccatgagaacaagtacctgctgctcaacaatcaggag
ctaaatgaactcagtgccatctctctgaaagccaacatccctgaggtggaagctgtcctc
aacactgacaggagtctagtgtgtgacggcaagaggggcttactaactcggctgctgcag
gtcatgaagaaggagccagcagagtcttcattcaggttttggcaagcccgggctgtggag
agtttcctccgagggaccacctcctatgcagaccaaatgttcctgttgaagcgaggcctt
ctggagcacatcctatactgcatcgtggacagcgagtgcaagtcgagggatgtactccag
agctactttgacctcctgggagagctgatgaagttcaacgttgatgcgttcaagagattc
aataaatatatcaacactgatgcaaagttccaggtgttcctgaagcagatcaacagctca
ctggtggactccaacatgctggtgcgctgtgtcactctgtcgctggaccgatttgaaaac
caggtggacatgaaagtggccgaggtcctgtccgagtgccgcctgcttgcctacatatcc
caggtgcccacgcagatgtccttcctcttccgcctcatcaacatcatccatgtacagaca
ctaacccaggagaatgtgagctgcctcaacaccagcctggtaatcctgatgctggcccga
aggaaagagcggctgcccctgtacctgcggctactacagcgaatggagcacagcaagaaa
tacccaggcttcctgctcaacaacttccacaacctgctgcgcttctggcagcagcattac
ctgcacaaggacaaggacagcacctgtctggagaatagctcctgcatcagcttctcatac
tggaaggagacagtgtccatcctgttgaacccagaccgccaatcaccctctgccctggtc
agctacatagaagagccctacatggacatagacagagacttcactgaggagtga
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