Arvicanthis niloticus (African grass rat): 117704136
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Entry
117704136 CDS
T08817
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117704136 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
117704136 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117704136 (Taf4)
03036 Chromosome and associated proteins [BR:
anu03036
]
117704136 (Taf4)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117704136 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
117704136 (Taf4)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117704136 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
117704136
NCBI-ProteinID:
XP_034352037
LinkDB
All DBs
Position
2:complement(146078273..146144876)
Genome browser
AA seq
1029 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRRPGSSSPRRLLVPAGPA
PAPAKLRPPPEASAGPCPVVAAAATAAGPDPAAAAPPAGPGASKPGPPGPPGPGAAQTLN
GSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAAPSPPAAPAPAAPPPPAPPAP
VAPARPPGHPAAPAPPVSPAAAAAAAQNGAAPAPAAASGGAAGLGQPGAGAQGAKAEAPK
PGPGPGPAAAAAAAGVAGGGAAGGVLLGPAMPGALPGPAPGTPAGLAKGAAAATPSLPRT
PAATTGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQ
MQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQ
PTTTLQRSPGVQPQLVLGGSAQPASLGTATAVQTGTPQRTVPGASTTSTAATETMENVKK
CKSFLSTLIKLASSGKQSTETAANVKDLVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVP
FLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSSSVQRTAGKTAASVTSA
LQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHNRIM
LTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAVAAQKNKLKEPGGGSFRDDDDIND
VASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHGITELHP
DVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQ
RKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRK
KRKVDCAGPGSGAEGSGPGTAVPGGSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHS
LLLYKAFLK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcgcccgggctccagctcaccgcgccgcttgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgccccgtcgtc
gccgccgccgccaccgccgccgggccggatcccgccgccgccgccccgcccgccggcccc
ggcgcctccaagcccggcccgcctggcccgcccggccccggcgccgcgcaaactttgaat
gggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccggtcaacaac
gggcccgcgccgccgcccgccgccggctctgtcatccaggcggcccccgcgcccgccgcg
ccctcgccgcccgccgcgcccgcgcccgccgcgcccccgccgcccgcgcccccagcgccc
gtcgcgccagcccggccgcccgggcaccccgccgcgcccgcgccccccgtgtcacccgcc
gccgccgccgccgccgcgcagaacggggccgctcctgcccccgccgcggcctccgggggc
gccgcggggttgggccagccgggcgcgggcgcgcagggggccaaggccgaggcgcccaag
cccggacccgggccggggccggcggcggcggcggcggcggcgggggtcgcgggcgggggc
gcggcgggcggtgtgctgctcgggcccgccatgccgggcgcgctgccggggcctgcgccc
gggacccccgcggggctggcgaagggcgcggccgcggcgacccccagcctgcctcggacg
ccggcggccaccaccggcgctatccgggccacgctgacgcccaccgtgctggccccgcgc
ctgccgcagccgccgcagaacccgaccaacatccagaacttccagctgcccccaggaatg
gtcctcgtgcggagtgagaatgggcagttgttaatgattcctcagcaggccctggcccag
atgcaggcccatgcccaggcccagcctcagagtaccatggcaccccgtcctgcaaccccc
acaggtgctccacctgtccagatctccaccgtgcaggctccaggaacacctattattgca
cggcaggtgaccccaactaccataattaagcaagtgtctcaggcccagacgacggtacag
cccactacaaccctacagcgctctcctggggtacagcctcagctggttctgggtggctcc
gcacagccagcctcacttggaacagccacagctgttcagacagggacacctcaacgaaca
gtccctggggccagcaccacctccacagctgccacggaaactatggaaaatgtgaaaaaa
tgcaaaagttttctatctacattaataaaactggcttcctctggtaaacagtctacagag
acagcggctaatgtgaaagatttagtacaaaacttactggatgggaaaattgaagcagaa
gatttcactagcaggttatatcgagaactgaactcttcacctcagccttaccttgtgcct
ttcctgaagaggagcttacctgccttgagacagctgaccccagactccgcggccttcatc
cagcagagccagcagcagcagccgcctgcctcgcaggccacgactgcattgacggctgtg
gtgctgagcagctcagtgcagcgcacagctgggaagacggctgcctcggtgaccagcgcc
ctccagcccccggtcatcagcctcacgcagcccacacaggttggcgttggcaagcaggca
ccgcccacaccactggtgatccagcagcccccgaagcctggagccttgatccggcccccg
caggtgaccttgacgcagacacccatggtcgcattgcggcagcctcacaaccggatcatg
ctcaccacaccacagcagatccaactgaaccagctgcagccagtccctgtggtgaaaccc
accgtgttacctggaaccaaagccctttctactgtatctgcacaagcagtcgctgcacag
aaaaacaagctcaaggagccagggggaggctcctttcgggatgatgatgacatcaatgat
gttgcgtcgatggctggagtgaacctgtctgaagaaagtgcaagaatattggccacaaac
tctgagttggtggggacgttgacccggtcctgtaaagacgacaccttcctcctccccgca
cctttgcagaggaggatactggaaataggtaaaaagcacggcatcacggaactgcatcca
gatgtagtgagttacgtgtctcatgccacacagcaaaggctgcagaatcttgtagaaaaa
atatctgaaacggctcagcagaaaaacttctcttataaggacgacgacagatatgagcaa
gcaagtgatgtccgggctcagctcaaattctttgaacagctggatcagattgaaaagcag
aggaaagatgagcaggagagggagatcttgatgcgggcagcaaagtctcgatccagacaa
gaagacccagagcaattaaggttgaagcagaaagcaaaagagatgcagcagcaggagctg
gctcagatgcgacagcgagatgccaacctcactgcattggcagcgattgggcccaggaaa
aagaggaaagtggactgtgctgggcccggatcgggagcagagggctcaggcccaggcaca
gcagtcccaggcggctccggcgtgggaacccccagacagttcacacggcaaagaatcacg
cgggtcaacctcagggacctcatattttgtttagaaaacgagcgtgagacaagccattca
ctgttgctctacaaagcattccttaagtaa
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