Arvicanthis niloticus (African grass rat): 117704147
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Entry
117704147 CDS
T08817
Name
(RefSeq) tetratricopeptide repeat protein 30A2
KO
K19683
tetratricopeptide repeat protein 30
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117704147
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
117704147
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_7
TPR_16
TPR_CcmH_CycH
ANAPC3
TPR_Slam
TPR_14
SRP_TPR_like
YfiO
ARM_TT21_C
TPR_8
TPR_6
Motif
Other DBs
NCBI-GeneID:
117704147
NCBI-ProteinID:
XP_034352050
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All DBs
Position
2:complement(51497346..51499592)
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AA seq
664 aa
AA seq
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MAGLSSSQIPDGEFTAVVYRLIRDSRYSEAVQLLSAELQRSPRSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVAFLLDNPTFYSRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEAGEDSGGENDPDGLVNMGCLLYKEGHYEAACSKFFSAL
QASGYQPDVSYNLALACYSNRHYAPALKHIANIIERGIRQHPELGVGMTTEGIDVRSVGN
TVVLHQTALVEAFNLKAAIEYQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDAK
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTEQLRRLTKQVQEARHNRDDEVVIKAVNEYDETLE
KYIPVLMAQAKIYWNLENYPMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYGDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHT
IMLRDSVIQECVQFLEHCEIFGRNIPAVLEQPLEEERMHIGKNTVTYESRQLKALIYEII
GWNM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctgagcagctcgcagatccccgacggtgagttcacagcggtggtgtacagg
ctcatccgcgactcccgctactcagaggcagtgcagctgctgagcgcagagctgcagagg
agtccccgcagccgcgcagggctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgagcttgctgcagagtgctatgagcaactgagccagatgcacccagaactcgagcag
taccgcctgtaccaggcccaggcgctgtacaaggcctgcctgtatccagaggccaccagg
gtcgccttcctcctggacaaccctaccttctatagccgagtccttcgtctccaagctgct
atcaagtacagtgaaggtgacctcccaggagcccggagcctggtggagcagctgctgagt
ggggaagctggagaagacagtggaggggagaatgatccagatggtttggtcaacatgggt
tgtctgctctacaaggagggtcactatgaagctgcctgttccaagttcttttcagctttg
caggcttctggctaccagcccgatgtatcttacaacctagctttagcttgttacagcaac
aggcactatgccccagcgctgaaacatattgccaatatcattgagcgtggcatccgtcaa
cacccagaacttggtgtgggcatgaccactgaaggcattgatgttcgcagtgttggcaac
actgtagttcttcaccagactgctctggtcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactatgaggcagcccaggaagccctcactgacatgccacccagagca
gaggaagagttggaccctgtaaccctgcacaaccaggctctgatgaacatggatgccaag
cccacagagggcttcgaaaagctccagtttctgctccagcagaacccctttcccccggag
acctttggcaacctgttgctgctttactgtaaatatgagtattttgacctggcagctgat
gttctagcagaaaatgcccacttgacttacaagttcctcacaccctatctctatgacttc
ttggatgccatgatcacttgccagacagctcctgaagaggctttcattaaacttgatggg
ttagctggcatgctcactgagcaactcaggagactcactaaacaagttcaagaagcaagg
cataacagagatgatgaagtagtcataaaggctgtgaatgaatatgatgaaacgcttgag
aagtatatccctgtactgatggcccaggcgaaaatctactggaatcttgagaattatcca
atggtggagaagatcttccgcaaatctgtggaattctgtaatgaccacgatgtgtggaag
ctgaatgtggcccatgttctcttcatgcaggaaaacaagtacaaagaggccattggtttc
tatgagcccattgtcaagaagaattatgataacatcctgagtgtcagcgctatcgtgtta
gccaacctctgtgtttcctatatcatgacaagtcagaatgaggaggctgaggagctgatg
aggaagattgagaaggaggaggaacaactctcttatggtgacccagacaagaaaatctac
catctttgcattgtgaatttggtgataggaaccttgtattgtgccaaaggaaactatgac
tttggcatctctcgggtcatcaaaagcctggagccttaccataaaaagctgggcactgat
acatggtattatgccaaaagatgcttcttgtccttgctagagaacatgtcgaagcacaca
atcatgctgagggacagtgtcattcaagaatgtgtccagtttctagagcactgtgaaatt
tttggcagaaacatccctgctgttctagaacagcccttggaggaagaaagaatgcacatt
ggaaagaatacagtcacgtatgagtcaagacagttgaaagctttgatttatgagatcata
gggtggaatatgtag
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