Arvicanthis niloticus (African grass rat): 117704166
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Entry
117704166 CDS
T08817
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117704166 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117704166 (Polr1b)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117704166 (Polr1b)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117704166 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF7757
Motif
Other DBs
NCBI-GeneID:
117704166
NCBI-ProteinID:
XP_034352074
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All DBs
Position
2:99981100..100007500
Genome browser
AA seq
1135 aa
AA seq
DB search
MEVDGRWRNLPSGPSLKHLTDPSYAVPPEQQKAALQDLTRAHVDSFNYAVLEGLSLAVQA
IPPFEFAFKDERISLTIVDAVISPPSVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGVPKGIIKQFLGYVPIMVKSKLCNLYNLPPQVLIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGLGYTQFGVSIHCVREEHSAVNMNLHYVENGTVMVNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEEDSFFKNCVSQMLRIVMEEGCHTQKQV
LNYLGERFRVKLSLPDWYPNEEAAEFLFNQCICIHLKSNTDKFYLLCLMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMENWLASIKIALDKRAQKTNVSINNENLMKIF
SMGTELTRPFEYLLATGNLRSKTGLGFMQDSGLCVVADKLNFVRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTAVCEVVTKFVYTASIPALLCGLGVT
PFDAAPCRPYSDCYPVLLDGVMVGWVDKELAPEVADTLRRFKVLREKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLDLGREELIGTMEQLFMNIAIFEDEVFGGVSTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPCMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKFKQGDDSLVFGVKPGDPRVMQKLDDDGLPFIGAKLEFGDPYYSYLNLNTGEGFVVY
YKSKENCVVDNIKVCSNDTGSGKFKCICITVRVPRNPTIGDKFASRHGQKGILSRLWPTE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacggtcggtggcggaacctgcccagcgggcccagcttaaagcatttgacc
gacccctcgtacgcggtccccccggagcagcaaaaggcggctttgcaggacctgacgcgg
gcgcacgtggactccttcaactacgcggtgctggaggggctgagcctcgcggtgcaagcc
atacctccttttgagtttgctttcaaagatgagcgcatatctcttactattgtggatgct
gtcatcagtccaccctcagtgcccaaagggaccatctgcaaagagctcaacgtttatcca
gctgagtgccgaggccgaaggagcacctaccgagggaagctgacggctgatatcagctgg
gctgtgaatggagtccccaaaggaatcattaaacagtttcttggctatgttcccatcatg
gtaaagtctaagctttgcaacttatacaaccttcctcctcaagtcctcattgagcaccat
gaagaggcagaggaaatgggcggttattttataatcaatggcattgaaaaagtcatccgt
atgttgattatgcctcggagaaatttccccatcgcaatggtaaggccgaaatggaaaagc
agaggactcggctacactcagttcggggtttcgatacactgtgtgagagaggaacactct
gctgtcaatatgaaccttcactatgtggagaatggcacagtcatggtaaactttatttac
cgaaaggagctgtttttccttcctttgggatttgcactcaaggcacttgtgagcttttct
gattatcagattttccaagagctcatcaaaggcaaagaggaggactctttctttaagaat
tgtgtttctcagatgctgaggattgtaatggaagagggttgtcacacacagaagcaggtc
cttaactacctgggtgaacgcttcagagtgaagctcagtcttcctgactggtaccctaat
gaggaagctgccgagttcctgtttaaccagtgcatctgcatccacttgaaatccaacact
gacaagttctacctgctctgcctcatgacccggaagctctttgctttagccagaggagag
tgcatggaggacaaccctgatagtttagtgaaccaagaagtccttacccctgggcagctc
ttcctgatgtttctgaaggaaaaaatggaaaattggctggcgtctattaaaatagcttta
gataagagggctcagaaaaccaatgtttccataaacaatgaaaatttgatgaagattttt
agcatgggaacagagctaacaagaccgtttgagtatcttcttgctactgggaatctgcgt
tctaaaacaggtctcggcttcatgcaagactctggcctgtgtgtggtggctgacaagctg
aacttcgttcgctatctctcccatttccgctgtgtgcacagaggggccgacttcgccaag
atgaggaccaccaccgtgcgcaggctgctgccagaatcctggggcttcctctgccccgtg
cacaccccagacggtgcaccgtgtgggctgctgaaccacctgactgccgtgtgtgaggtt
gttaccaagtttgtgtacacagcgtctattccagccttgctctgtggcttaggagtcact
ccttttgatgcagcgccatgccgaccgtacagtgactgctaccccgtcctgctggatggt
gtcatggtgggctgggtggataaggagcttgctcctgaagttgcagacactctccgtaga
ttcaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctgattcccatg
acaggaaaaccaagtctgtacccagggctgttcctcttcaccactccctgcaggctggtg
aggcctgtgcagaacttggacctgggcagagaagagctcattggcactatggaacagctc
ttcatgaacattgccatctttgaggacgaggtttttggtggagtttccacacaccaggag
ctcttccctcacagcctgctgagcgtgatcgccaacttcatccccttctcagatcacaac
cagagtcctcggaacatgtaccagtgccagatgggtaagcagaccatgggctttccgctg
ctcacttaccaagaccgatcagataataaactctatcgtctccagacacctcagagccct
ctagtgagaccgtgcatgtatgattactatgatatggacaactatccgatcgggacaaat
gccattgtagctgtgatctcctacactggctatgacatggaggatgccatgattgtgaac
aaggcttcctgggaacgaggctttgctcatggaagcgtctacaagtctgagttcatagac
ctctctgaaaaatttaagcaaggggacgatagtctggtgtttggggtcaaacctggtgac
ccacgggttatgcagaagctggacgatgatggattgccattcataggagcaaagctggaa
tttggtgatccttactacagctacctaaaccttaacactggtgaaggctttgtggtttac
tataagagtaaagaaaactgtgttgtggacaacatcaaagtgtgtagtaatgacacgggc
agtgggaagttcaagtgtatctgcatcacagtccgagtcccccggaacccaactattggg
gataagtttgccagccgtcatggacagaagggcattttgagcagattgtggccaactgag
gacatgcctttcactgagagtgggatggtgccggacattctgttcaatcctcatgggttt
ccctcccgtatgaccataggtatgttaatcgagagtatggctgggaagtctgcagctctg
catggtctctgccatgacgccacacccttcatcttctccgaggagaactctgccctagag
tactttggtgagatgttaaaggctgccggctacaacttctatggcaccgagagattgtac
agcggcatcagcgggatggagctggaggccgacattttcattggtgtggtttattaccag
cgcttacgacacatggtgtcagacaaatttcaagtcagaacaactggagccagagacaaa
gtcaccaaccagcccatcgggggacgaaatgtccagggtgggatccgctttggggagatg
gagcgggatgctctgttggcgcacggtacgtcctttcttcttcatgaccggctcttcaac
tgctctgaccgttctgtcgcccacgtatgtgtgaagtgtggcagtttgctttccccgctg
cttgagaagcctcctccatcttggtctgcaatgcgtaacagaaaatacaactgcactgtg
tgtggccgcagcgacaccatcgacaccgtctctgtgccatacgtcttccggtactttgta
gctgagctggcagccatgaacatcaaagtgaagctggatgtcatttaa
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integrated database retrieval system
