Arvicanthis niloticus (African grass rat): 117704208
Help
Entry
117704208 CDS
T08817
Symbol
Snta1
Name
(RefSeq) alpha-1-syntrophin isoform X1
KO
K24063
alpha-syntrophin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04820
Cytoskeleton in muscle cells
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
anu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117704208 (Snta1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117704208 (Snta1)
05412 Arrhythmogenic right ventricular cardiomyopathy
117704208 (Snta1)
05414 Dilated cardiomyopathy
117704208 (Snta1)
05416 Viral myocarditis
117704208 (Snta1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117704208
NCBI-ProteinID:
XP_034352146
LinkDB
All DBs
Position
2:complement(123823927..123853988)
Genome browser
AA seq
499 aa
AA seq
DB search
MASGRRAPRTGLLELRSGAGSGGGGERWQRVLLTLAEDTLTVSPADGEPGPEPEPAQLNG
AAEPGAAPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQT
EALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVSPYFKNSTCGTSVG
WDSPPASPLQRQPSSPGPQPRNLSEAKHISLKMAYVSRRCTPTDPEPRYLEICAADGQDT
LFLRAKDEASARSWAGAIQAQISTFIPWVKDELQALLTAAGTAGSQDIKQIGWLTEQLSS
GGTAPTLALLTEKELLLYCSLPQTREALSRPTRTAPLITTRLVHSGPSKGPVPYDAELSF
ALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVH
IDKGFTLWAAEPGAARAVLLRQPFEKLQMSSDDGTSLLFLDFGGAEGEIQLDLHSCPKTM
VFIIHSFLSAKVTRLGLLA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggcaggcgcgctccgcgcactgggttgctggaactgcgctccggggcgggc
tccgggggtggtggtgagcggtggcagcgggtgttgctcactctggcggaggacacgctg
accgtgagccccgccgacggcgagcccggcccggagcccgagcccgcgcagctcaacggc
gccgctgagcccggcgcggcgcctccacagctgccagaggcgctgctgctccagcggcgc
cgcgtgacggtgcgcaaggccgacgccggcgggctgggcatcagcatcaaggggggccgg
gaaaacaagatgcctattctcatttccaagatcttcaagggactggcagcagaccagaca
gaggccctctttgttggggatgccattctgtctgtgaatggtgaagatttgtcttctgct
acccatgatgaagcggtacaggccctcaagaagacaggcaaggaagttgtgttggaggtt
aagtacatgaaggaagtctcaccgtatttcaagaattctacttgcgggacctctgttggc
tgggactcacctcctgcctcacctcttcagcggcagccttcttcccctggcccccaaccc
cggaacctcagtgaggccaaacacatatctttgaagatggcgtacgtctcaaggaggtgt
actcccactgacccggagcccaggtatctggagatctgtgcagcagatggccaggacact
cttttcttgagggccaaggatgaggccagtgcaaggtcatgggcaggtgccatccaggcc
cagatcagcacattcataccttgggtcaaggatgagctacaggcactgctgacagccgca
ggtacagctgggagccaggacatcaagcagattggctggctgacagaacagttgtccagt
gggggtacagcaccaaccctggccctgctgactgagaaggagctgctcctctactgctct
ctccctcagactcgagaggccctgagcaggccgacccgcactgccccgctcattaccacc
aggctggtgcactcaggcccttccaagggcccagtgccctacgatgcagaactctccttt
gccctgcgcacgggtacacgtcacggtgtggacactcacctgttcagtgtggagtcgccg
caagagctggcagcctggacccgacagttggtggatggctgtcaccgggctgctgaaggc
gtgcaggaagtgtccacagcctgcacgtggaatggccgtccctgtagcctatctgtgcac
attgacaagggcttcacactgtgggcagctgagccaggagcagcccgagccgtgctgctc
cgacagcccttcgagaaacttcagatgtcatcagatgatggcacgagtctccttttcctg
gactttgggggtgctgaaggagagatccagctggacctgcactcgtgtcccaaaactatg
gtctttatcatccactctttcctgtccgccaaggtcacccgcttggggctcttggcctag
DBGET
integrated database retrieval system
