Arvicanthis niloticus (African grass rat): 117704247
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Entry
117704247 CDS
T08817
Symbol
Pax1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117704247 (Pax1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117704247 (Pax1)
BRITE hierarchy
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
117704247
NCBI-ProteinID:
XP_034352220
EnsemblRapid:
ENSANLG00005011972
LinkDB
All DBs
Position
2:117158273..117169816
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AA seq
450 aa
AA seq
DB search
MKFTLGLGSRAWRVSWERAAAAAAAAGPGAGGALGSGSLRVSSRRGPRLARALPLCLSGG
GGARALPDCAGPSPRRSGARQLAGPRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA
QLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQG
DPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPPQPALP
YNHIYQYPYPSPVSPTGTKMGSHPGVPGSAGHVSIPRSWPSAHSVSNILGIRTFMEQTGA
LAGSEGAAYSPKMEDWAGVNRTAFPTSPAVNGLEKPALEADIKYTQSASSLSAVGGFLPA
CAYPASNQHGVYSAPAAGYLSPGPPWPPAQAPPLAPHGAGVAVHGGELAAAMTFKHPSRE
GTDRKPPSPGGKATDALGSLHGLPIPASTS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccttgggcctggggtcgcgggcctggagagtgtcctgggagcgggcggcg
gcggctgcggcagcggcgggccctggggctggcggcgcgctgggcagcggctcactgcgc
gtctccagccgccgcggccctcggctcgcgcgcgccctccctctatgcctctccggcggt
ggcggcgcccgagctctcccggactgtgccgggcccagcccccgccgctccggcgccagg
cagctggccggcccgcgcgcgatggagcagacgtacggcgaagtgaatcagcttggtggc
gtgtttgtcaacggccgtcccctgcccaatgctatccgcctgcgcatcgtggagctagca
cagctgggtatccgaccctgtgacatcagtaggcaactgcgagtctctcatggctgcgtg
agcaaaatcctggcgcgctacaacgagaccggctccatcctgcccggggccattgggggc
agcaaacctcgagtcaccacccccaacgtagtgaagcatatccgggactacaagcaggga
gatcctggcatctttgcctgggagatccgtgaccggctactggctgacggcgtctgtgac
aagtacaacgtgccctctgtgagttccatcagtcgcatcctgcgaaataagattggcagc
ctggcgcagccagggccatacgaagcaagtaagcagccgccgccgcagcctgcgctgccc
tacaaccatatctaccagtacccctaccccagcccagtgtcacccacgggcactaaaatg
ggcagtcatcccggggtccccggctcggcgggccacgtcagtatcccgcgatcatggccc
tccgcacattcagtcagcaacatcctgggcatccggacgtttatggagcaaacaggggcc
ctggcggggagcgaaggcgctgcctactcccccaagatggaagactgggctggtgtgaac
cgaaccgccttccccacctcgccagcagtgaatggactcgagaaacctgccttggaggca
gacattaaatatactcagtcggcttccagcctctccgcagtgggcggcttcctgcctgcc
tgcgcctacccggcttccaaccagcatggagtatacagtgctccagcagccggctaccta
tccccaggcccgccctggccaccagcccaggcacccccgctggcgccccacggagctggt
gtggccgtgcacggcggggagcttgcagcggcaatgaccttcaaacaccccagccgagaa
gggaccgacagaaagccccccagcccgggaggcaaggccacggacgcactgggtagctta
cacggactgcccatcccggcctcgacttcctag
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