Arvicanthis niloticus (African grass rat): 117704457
Help
Entry
117704457 CDS
T08817
Name
(RefSeq) tetratricopeptide repeat protein 30B
KO
K19683
tetratricopeptide repeat protein 30
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117704457
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
117704457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_7
TPR_16
TPR_CcmH_CycH
TPR_14
ANAPC3
ARM_TT21_C
TPR_Slam
SRP_TPR_like
TPR_8
TPR_6
Ribosomal_S16
Motif
Other DBs
NCBI-GeneID:
117704457
NCBI-ProteinID:
XP_034352480
LinkDB
All DBs
Position
2:complement(51454027..51456702)
Genome browser
AA seq
664 aa
AA seq
DB search
MAGLSSSQIPDGEFTAVVYMLIRDSRYSEAVQLLSAELQRSPRSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVAFLLDNPAYQTRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEGVEDSGGENDYAGQINLGCLLYKEGHYEAACSKFLAAL
QASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGIRQHPELGVGMTTEGIDVRSVGN
TVVLHQTALVEAFNLKAAIEYQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDAK
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTEQLRKLTIQVQDSRHSRDDESAKKAVNEYDETLE
KYIPVLMAQAKIYWNLENYPMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHT
IMLRDSVIQECVQFLEHCEIFGRNIPAVLEQPLEEERMHTGKNTVTYESRKLRALIYEII
GWNV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctgagcagctcgcagatccccgacggtgagttcacagcggtggtgtacatg
ctcatccgcgactcccgctactcagaggcagtgcagctgctgagcgcagagctgcagagg
agtccccgcagccgcgcagggctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgagctcgctgcagagtgctatgagcagctgagccagatgcacccagaactagagcag
taccgcctgtaccaggcccaggcgctgtacaaggcctgcctgtatccagaggccaccagg
gtcgccttcctcctggacaaccccgcctatcagactcgagtccttcgtctccaggctgct
atcaagtacagtgaaggtgacctcccaggagcccggagcctggtggagcagctactgagt
ggggaaggtgtggaggacagtggaggggagaatgattatgctggtcagatcaacctgggt
tgtctgctctacaaagagggacactatgaagctgcctgctccaagttcttagcggctcta
caggcttctggctaccagcctgacctttcctacaatttggctttggcctattacagcagt
cggcagtatgcgcctgctctgaagcatatcgctgacatcattgagcgtggcatccgtcaa
cacccagaacttggtgtgggcatgaccactgaaggcattgatgttcgcagtgttggcaac
actgtagttcttcaccagactgctctggtcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactatgaggcagcccaggaagccctcactgacatgccacccagagca
gaggaagagttggaccctgtaaccctgcacaaccaggctctgatgaacatggatgccaag
cccacagagggcttcgaaaagctccagtttctgctccagcagaacccctttcccccggag
acctttggcaacctgttgctgctttactgtaaatatgagtattttgacctggcagctgat
gttctagcagaaaatgcccacttgacttacaagttcctcacaccctatctctatgacttc
ttggatgccatgatcacttgccagacagctcctgaagaggctttcattaaacttgatggg
ttggctggcatgctcactgagcaactccggaaactcaccatacaagtacaggattcaaga
catagtagagatgatgagtctgccaaaaaggctgtgaatgaatatgatgaaacccttgag
aagtatatccctgtactgatggctcaggcgaaaatctactggaatcttgagaattatcca
atggtggagaagatcttccgcaaatctgtggaattctgtaatgaccacgatgtgtggaag
ctgaatgtggcccatgttctcttcatgcaggaaaacaagtacaaagaggccattggtttc
tatgagcccattgtcaagaagaattatgataacatcctgagtgtcagcgctatcgtgtta
gccaacctctgtgtttcctatatcatgacaagtcagaatgaggaggctgaggagctgatg
aggaagattgagaaggaggaggaacaactctcttatgatgacccagacaagaaaatctac
cacctttgtattgtgaatttggtgataggaaccttgtattgtgccaaaggaaactatgac
tttggcatctctcgggtcatcaaaagcctggagccttaccataaaaagctgggcactgat
acatggtattatgccaaaagatgcttcctgtccttgctagagaacatgtcgaagcacaca
atcatgctgagggacagtgtcattcaagaatgtgtccagtttctagagcactgtgaaatt
tttggtagaaacatccctgctgttctagaacagcccttggaggaagaaagaatgcacact
gggaagaatacagtcacatatgagtcaagaaaattaagggctctgatttatgagataatt
ggatggaatgtgtaa
DBGET
integrated database retrieval system
