Arvicanthis niloticus (African grass rat): 117704674
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Entry
117704674 CDS
T08817
Symbol
Cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117704674 (Cfap43)
Cilium and associated proteins [BR:
anu03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
117704674 (Cfap43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_HPS5
WDR55
ANAPC4_WD40
Beta-prop_EML
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
117704674
NCBI-ProteinID:
XP_034352806
LinkDB
All DBs
Position
1:complement(154135423..154225412)
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AA seq
1676 aa
AA seq
DB search
MSQGQERDEVTTSASVTASASAHYSSGASLSVRWVQGFPSQNVHFVNDQTICYPSGNYVI
FINLETKKKTVLQCINGIVGVVATNAPGEVVAFSDRRLKPIIYIYSFPSLTRKNKLKGDI
LLDYTLLCFSYCGTYLASYSSLPEFELTLWNWESSVILCKKSNPGMDVTQMSFNPMNWHQ
MCLSSPSAVSVWTIERSNQEHHFRTRLVKLPLEDGTFLNETDVLFPTSLQKDLIYGPILP
LSAIAGLVGEEAETFRPKDDIYPLLHPTMHCWTPSSDLYVGCEEGHLLMINTETLKVTVL
QKAEEFPVPDGAQLINPLILAYQKDGILASGIDGVIYSFIIKDSKYQVKTFLEFDGPVPH
LVFSPSYKMLLIQTDKGSVYIYKFGAEPVLDKVLDACDGKVQTVSFITPGNKYFLTLTSS
GEVSILSLEDGTCTGRIFLRTQATALACCPSSLSAAVGTVDGYVYFLNLIDAESPQLIHQ
AYLSQSPVKTLNYDQRGIFLLVGTEEGNIFVIDSRPSKSFQIFGFTETGKDILQISTVSV
VESDVVEVLVLSPLPEMGRSRMEYFTLPIMLPEVVPENFSDERGRLKDDFTHKYLYEVEH
TLSSAVLGFTGSKVYGFCSQVPYICSYIMPVKEHTGVCVLKPHQKVQSKQYGAGTIYMSS
HGLWLMTIAKCGILCIRDMFSLETFVRCRSHSHQGQGIQNMKMSMDGQNILVNGKDDNTL
VYLKWKRLGSNIANEIFEHCHQLVLSLSKTMEKESEYLASWRDHQDVSQEETAESQKKLS
LDSSQEDLVADHKNTPWTQQKMEEAIKKEVRMFSPRRKEIKRGIKELAQIIALMMEENEK
VDVIAKLDEQEFCLDADELERLHDECEEELAKMRKDVEMHNLAKSYLTELIREECWNSMA
VKGRALKCFHIPYVVDNFPMKERTEEELQELSKVMQQKKTEIECLKLRKEIVEAQSTATM
VKEHREEEDEEEEDEEKAVKTTSLPNYLLGSLSTDFGADTSLLTSQLELHSREEKINQII
LLKDIIYNIKKTFNSEFDAAYRQKEIEIARVKEKNVRIAEIISDLELDETVWQPVFEDSE
KPERALVVEDDEISFKKYIPPWQQDKTELLKSREMERLQQARLSDARQRGLMDMMGGVLE
VKKEDILRMAIPQPSFMSKADALWSEDERKQFKEYEKKVKELNEERDKYRKSLEAELKKL
QSSIQENTQNFDEHLKRLFERRVKAEMVVNQEELKINNLVFSLLLDEELSSREQFLNNYL
SKKQEEKTKTSEAIQKAREDLDVFKEHHDTVLAEDKILDRSFKKEFSDISGHQVDILYKL
FKRRPRVSKQKTQADVTSLVPYGERPGSAKLNKENFAQLMKAMDELDNVNNMPEGLDPSV
WEHFCTTRRAKVENEYKVKQKAACLLEMTTFLRKRMEDDDAVHHEIERVFHELVRLQDEK
VRYQVNLTVQVLLKQGQVELENFQLTLEYSDAILINKNIIEDLNSVIRTQGQKKVASMME
SKEVHKGIYQIEWEHKKMEMEMEDLNQKAWDIQMLFFSRDRQKYLNEPNYETVIAIQIGI
MEQTISVIDKNHKKNVENCKKLLKKLGKYSNQKDIANYTLSCNLREELVAVSERQDICNE
IGSKLTCEKIARERYDNLMKQQKLTNISKQQAEQISILQAEVERLRMKTFPALVPM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaggccaggagcgcgacgaagtcactacctctgcctctgtcacagcctctgcc
tctgcccactactcctctggagcctccctgtcggtgagatgggtgcaaggattccctagt
cagaacgttcattttgtcaatgaccagaccatctgctacccttctgggaactacgtaata
ttcattaacctcgaaaccaagaagaagactgtactccagtgtattaatgggatagtgggc
gtcgtggcaactaatgctcccggtgaagtagtggctttctctgaccgcagacttaaaccc
atcatctacatatacagttttccttcgctgaccagaaaaaacaagttaaaaggcgacatc
ctcctggactacactctactttgcttcagttactgtggcacctacctggccagttactcg
tcactcccagagtttgagctgactctctggaactgggaatccagtgtcatcttgtgcaag
aaatcaaatccagggatggatgtgacccagatgtccttcaaccccatgaactggcaccaa
atgtgtttatcaagtccaagtgcagtgagcgtgtggaccattgaaagaagtaaccaggag
catcatttccggaccaggttggtaaagctacccctagaagacggaacgttcttaaatgaa
accgatgtgcttttccccacctctctgcaaaaggatctcatttatgggcctatcttgcca
ctgtcagccattgccgggctggtgggcgaagaggcagagacattcaggccaaaagatgat
atatatcctctgcttcacccaactatgcactgctggactccgtcaagcgacctgtacgtt
gggtgtgaagagggtcatcttcttatgattaacacagaaaccttgaaggtgactgtgctc
cagaaggcggaggagtttccagtacctgatggagcccagctgatcaacccgctcatactg
gcataccaaaaggacggcatactggcttctggaattgatggtgtgatatactcgttcatc
atcaaagattcaaagtaccaagtgaagacctttcttgagtttgatgggccagtaccacat
ctggtgttctcccctagttacaaaatgctgctgattcaaacggacaaggggtctgtttat
atctacaagtttggcgcagagccagttctcgataaagtgctggatgcctgtgatgggaaa
gtccagaccgtcagctttatcacacctggaaacaaatacttcctgacgctcacaagttcg
ggggaagtttccattttatctttagaagacggtacttgtacaggcaggattttcctgagg
actcaggcaacagcgctggcatgctgcccttcttccctgtcggctgccgtggggacagtg
gatggctatgtatacttcctgaacctcattgacgcggagtcccctcagttgatccaccag
gcctacctctcccagtcaccagtgaagacactcaattacgaccagcgaggaatctttctg
ttagtcggtacagaagaaggaaacatctttgtcatcgattccagaccctcaaaatcattt
cagatttttggattcactgagacaggcaaggacatcctgcagatatccacggtgtctgtt
gtggaatcagacgtggtcgaagtcctggtcttgtccccgcttccagaaatgggaagaagc
aggatggagtacttcaccctgcctatcatgctaccagaagtggttcctgaaaacttttct
gatgaaagaggaaggctgaaagacgacttcacccacaagtacctgtatgaggtggagcac
actctgtcctctgctgtgctgggcttcacgggcagcaaggtctatggcttctgcagccag
gtgccatacatctgcagctacataatgcctgtaaaggaacacactggcgtctgcgtactt
aagcctcaccaaaaagtacagagcaaacagtacggggctggaacgatctatatgtcttct
catggattatggctgatgacaatagctaaatgtggaatcctctgtatccgagatatgttc
agcctggaaacctttgttcgatgtcggagtcattctcaccaggggcaagggatccagaac
atgaaaatgtcaatggacggacagaacatcctggtgaatggaaaagatgacaacaccctt
gtctacctcaaatggaagcgacttggatcaaacatagcaaatgagatctttgaacactgc
catcagctagtactcagtctgtccaagacaatggaaaaggagagtgaatacttagcttca
tggagagatcaccaggatgtgtcacaagaagagacagccgaatcccaaaaaaagctgagc
ttagactcatcacaagaggacttagtcgctgatcacaagaatacgccctggacccaacaa
aaaatggaagaggccatcaagaaggaggtgaggatgttctcccctagaagaaaggagatc
aaaagaggaatcaaggaacttgctcaaattattgcgttgatgatggaagaaaatgaaaag
gtggatgtcattgcaaaactagatgagcaggagttttgcctggacgctgatgagctggaa
aggcttcacgacgaatgtgaggaggagctagcaaagatgagaaaggatgtggagatgcac
aacttggccaagagctacttaaccgagctcatcagggaggagtgctggaactccatggcc
gtgaagggccgtgctctaaagtgttttcatataccctacgtggttgacaacttccccatg
aaagagcgcacggaagaagagctgcaggagctgagtaaagttatgcagcaaaagaagact
gagatagagtgtcttaagctccggaaggaaattgtcgaggcccagtctacagccaccatg
gttaaagagcatcgtgaagaggaggatgaggaagaagaggatgaagaaaaagcagtaaaa
accaccagtctgcccaattacctgcttggtagtttgagcactgattttggggctgacaca
tctttgttgacaagccaattggagcttcactccagagaggagaaaatcaaccagattata
ttgctaaaagatatcatttacaacataaaaaagactttcaatagtgaatttgatgccgcc
tataggcaaaaagagatcgaaattgcacgcgtgaaagaaaaaaatgttagaattgcagaa
attatttcagacctggaattggatgaaacagtctggcaaccagtgtttgaagacagtgag
aagccagaaagagcccttgttgtggaagatgatgagatttcatttaaaaaatacattcct
ccatggcaacaagacaaaacagaattgctcaagtcccgtgaaatggagcgattgcaacaa
gcacggctctctgatgcaagacagagaggcctgatggatatgatgggtggtgtcctggaa
gtcaagaaggaagacatcctcaggatggcgatcccgcagccctcattcatgtccaaagct
gatgctctgtggagcgaagatgagaggaagcaattcaaagagtatgagaagaaagtcaag
gagctgaatgaggagcgagacaagtacaggaagtctttagaagcagaactgaagaaactt
caaagttccattcaagagaacacacagaactttgatgagcatcttaagagactctttgaa
aggagagtgaaggcagagatggtcgtcaaccaggaggaactgaaaatcaacaaccttgtg
ttttctttgctgctggacgaagaactcagctccagggaacagttcctgaacaactacctt
tcgaagaagcaggaggagaaaaccaagacttccgaagccatccagaaagcgagagaagat
ctggacgtgttcaaggagcaccatgacaccgtactggcagaagacaaaatcctggatcgc
agcttcaaaaaggaattttctgatatttctggtcaccaggtggatatcctctacaaactt
tttaaacgccggccaagggtttccaaacagaaaacacaggcagatgtgaccagccttgtt
ccttatggagagcggccaggatctgccaagttaaataaggaaaactttgcccagctaatg
aaagccatggatgagttggacaatgtcaataacatgccagaaggcttggacccctctgtc
tgggaacatttctgcacaactagacgagcaaaagtggaaaatgaatacaaagtgaagcag
aaggcagcctgcctactagaaatgacgacttttctccggaagcgaatggaagacgatgac
gccgtacatcatgagatcgagagggtattccatgaactcgtccgattacaggatgagaaa
gtgagataccaggtgaatttgacagtacaagttcttcttaaacaaggacaagtggaactg
gagaatttccagttgactctggaatattctgatgcaattctcatcaataagaatataatt
gaagacttgaattctgtgattcggactcaagggcaaaagaaagttgctagcatgatggag
agtaaagaggtccacaaaggaatatatcagattgaatgggagcacaagaagatggagatg
gagatggaggatctaaaccagaaggcctgggacatccagatgctgttcttctcacgagat
cggcagaagtacctaaatgaaccaaactacgagactgtgattgccattcagattggaata
atggagcaaacgatcagtgttatagataagaatcataagaagaacgtagaaaactgcaaa
aaactactcaagaaattgggaaaatacagcaatcagaaagatatagcaaattacacccta
agctgtaatctacgggaagaactggtggccgtctcagagagacaagacatttgcaatgaa
atagggtctaagctgacctgtgagaagattgccagagaacgctacgacaacctgatgaaa
cagcagaagctgacgaacatctccaagcagcaagctgagcagatttcaatactgcaggct
gaagttgaaagactgaggatgaaaacattccctgctctcgtcccaatgtag
DBGET
integrated database retrieval system
