Arvicanthis niloticus (African grass rat): 117704927
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Entry
117704927 CDS
T08817
Symbol
Samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117704927 (Samd4a)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117704927 (Samd4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
117704927
NCBI-ProteinID:
XP_034352918
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Position
3:complement(70531700..70749060)
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AA seq
711 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQR
QNSDDKINGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSS
PTTTPEVRRHEPSPMESPSPDCKDSAAAATSPTASASAGASGGLQPPQLSSCDGELAVAP
LPEGDLPGQFTRVMGKVCTQLLVSRPDEENITSYLQLLDKCLVHEAFTETQKKRLLSWKQ
QVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQYQIASRNVP
SARLGLLGTSGFVSSNQRHTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLP
VHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaatgagtgc
gagcagactgttgcgctgctgtcgctactcaagcgcgtgagccagacccaggcccgcttc
cttcagctctgcctggagcactcgctggccgactgcgccgagctgcacgtcctggaagga
gaggccaacagcccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tcccttctgctaactcacctgcctttgctgaagccaggaaacctcgacgcaaaagtagag
tatatgaaactgctgcccaagatcctggcacactctatcgaacacaaccagcacattgag
gagagcaggcagctgctgtcctatgctttgatccacccagccacttccttggaagaccgc
agtgcactagccatgtggctgaatcacttggaggaccgtacatccaccagctttggtagc
cagaaccgaggccgctcagactctgtggattatggacagacgcactactatcaccaaaga
cagaactctgacgacaaaatcaatggctggcagaactctcgggattctgggatttgcatc
agcgcctccaactggcaggacaagagcctgggctgtgagaacggccatgtgcccctctac
tcttcctcatctgtccccgccacaatcaacacaattggaaccagcacaagtacgattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
cctcagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcttggttaaaaagcctccgcctgcacaagtac
gctgcgcttttctcacagatgacttacgaggagatgatggccctcacggagtgtcaactg
gaggctcagaatgttaccaaaggcgcaagacacaaaattgtaatcagtattcagaagctc
aaagaaagacagaacctcctgaagtctttggaaagggacatcatcgaagggggcagcctg
cgcatccccctccaggagctgcatcagatgatcctgacacccatcaaggcctacagctct
cccactaccacccctgaggtgcgccgccatgagccctcaccgatggagagcccaagccct
gactgcaaagacagcgctgcagcagccaccagccccacagccagtgcctcagccggtgcc
agcggtgggctgcaaccaccccagctgagcagctgcgatggggagctggctgtcgcccct
ctgccggagggggacctcccagggcagttcacccgagtcatggggaaagtgtgcacacag
ctcttggtctccagacccgatgaggaaaatataacctcctatctacagctcttagacaag
tgtcttgttcacgaggcatttacagagacacagaaaaaaagattgttgtcatggaaacag
caggtgcagaagctctttcggtctttccctcggaaaacccttctagacatatcaggatat
cgacagcaaagaaatcgtggctttgggcagtccaactccctcccgacagccagctctgtg
ggcggcggcatgggtagacggaacccacgacagtaccagatcgcatctcggaacgtccct
tctgcccgccttggtctcttgggcaccagtggatttgtcagctccaaccagcgccacacc
gctgccaaccccaccatcatgaaacaaggaagacagaacctctggtttgccaaccctggg
ggcagcaacagcatgcccagccgcacccacagctctgtccagaagacccgctcgctgccc
gtgcatacttccccacaaaacatgctgatgttccagcaaccagaatttcagcttcccgtg
actgaacctgacatcaacaataggctggagtccttgtgcctcagtatgacggagcatgcc
ctgggagacggggttgaccggacctccacaatctag
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