Arvicanthis niloticus (African grass rat): 117704965
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Entry
117704965 CDS
T08817
Symbol
Rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117704965 (Rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117704965 (Rbm26)
03041 Spliceosome [BR:
anu03041
]
117704965 (Rbm26)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117704965 (Rbm26)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117704965 (Rbm26)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117704965 (Rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
Motif
Other DBs
NCBI-GeneID:
117704965
NCBI-ProteinID:
XP_034353009
LinkDB
All DBs
Position
3:17743312..17815522
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AA seq
1012 aa
AA seq
DB search
MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVDFLQHQEKDIKKEELTKEEEREKKF
SRRLNHSPPQSSSRYRDNRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVSS
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPGNL
RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
SLFTAVFVLPDTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKP
PNKSSMRIVVDSESRKRTIGSGEPGVSTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLE
LRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLN
NRFIKVYWHREGTTQQLQTTSPKVIQPLVQQPILPVVKQSVKERLGPVPSGTVEPAEAQS
ATSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVST
PAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMKSEDKAEIMK
TLEILTKNITKLKDEVKSTSPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELR
RKYTELQLEAAKRGILSSGRGRGIHTRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEI
SAFTESDREDLLPHFAQFGEIEDCQIDDSSLHAIITFKTRAEAEAAAIHGARFKGQDLKL
AWNKPITNMSAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggtttctaagatgatcattgaaaacttcgaggcgctcaagtcctggctcagcaagacc
ctcgagcccatctgtgatgctgatccatcagccctagcaaaatatgttttggctctggta
aagaaagacaaaagtgaaaaagaattaaaggcgctatgtattgatcagctcgatgtattt
cttcagaaagagacacaaatatttgttgaaaaactttttgatgccgtgaatacaaagagt
tatctacctcctccagagcagccatcgtcaggaagcctgaaggtagactttcttcagcac
caagaaaaagatataaaaaaagaagagctcacaaaggaggaggagcgagagaagaagttt
tccagaaggttgaatcacagtcctccccagtcaagctcccgttacagagataatagaagc
cgtgatgagaggaaaaaagatgatcgttctcgaaaaagagattatgatcgaaaccctcct
cgaagggattcctacagagaccggtataacagaaggcgtgggagaagtcgcagctacagc
aggagtcgaagtcgaagctggagtaaagagaggcttcgtgacagggatagagatagaagc
aggacaaggagcaggagcaggacgcgaagcagggaaagggacttggtgaaacctaaatat
gacctggatagaacagatccattagagaataattatacaccagtctcgtcagtatccagt
atttcatctggccactatcctgtacctactttgagcagcaccattactgtaattgctcct
actcatcatggtaataacactaccgaaagttggtctgaatttcacgaagaccaagtagat
cacaactcttatgtaaggccaccaatgccaaagaaacggtgtagagattatgatgaaaag
gggttttgtatgagaggagacatgtgtccttttgatcatggaagtgacccagtagttgta
gaagatgtgaatttgccaggcatgctgcctttcccagcacagcctcctgttgttgaagga
ccaccgcctcctggattgcctccacctcctccaattcttactcccccacctgggaatctc
agaccccctgtgccacctccaggtccattaccacccagtctgcctcctgtcacaggacca
cctcctccacttcctcctttgcagccatctggcatggatgcaccacctaactctgcaacc
agctctgttcctactgtggtaacaactggcattcatcaccagcctcctcctgctccgccc
tctctttttactgcagtttttgtgttaccagatacatatgatacagatggctacaatcct
gaagccccaagcataacaaacacttccagacctatgtatagacacagagtccatgcacaa
aggcctaacttgataggactaacatcaggggacatggatttaccacctagagaaaagcct
cctaataaaagcagtatgagaatagtagtggattcagaatcaaggaaaagaactattggg
tctggggaacctggagtttctacaaagaagacatggtttgataaaccaaattttaatagg
acaaacagtccaggtttccagaagaaggttcaatttggaaatgaaaatactaaacttgaa
cttaggaaagttcctccagaattaaataatatcagcaaactcaatgaacattttagtcga
tttggaacattggttaacttacaggttgcctataatggtgatcctgaaggtgcccttatc
caatttgcaacttatgaagaagcaaagaaagcaatctcaagtacagaagcagtattaaat
aatcgctttattaaggtttattggcacagagaaggaactactcaacagttacaaactact
tcaccaaaggtaatacagccattagtccagcaacccattttacccgttgtgaaacagtca
gtcaaagagcggctgggtcctgtaccttcaggtactgttgaaccagcagaggcccagagt
gctacttcagaccttccccagaatgtaactaagttatctgtgaaggacaggttgggtttt
gtatcaaagccatctgtttcagcaactgaaaaggtgttgtctacatctactggtcttaca
aaaacggtgtacaatccagctgctttgaaggctgcacaaaaaaccttactagtgtctacc
cctgcagttgataataatgaagcacagaaaaagaagcaggaggcactgaaacttcagcag
gatgtaagaaaaaggaagcaagagattttagaaaagcacattgaaacacagaagatgcta
atttcaaaactagagaaaaacaaaaccatgaagtctgaagataaagcagaaataatgaaa
acgttagagattttgacaaaaaatattaccaagttgaaagatgaggttaaatctacatct
cctggacgctgtcttccaaaaagtataaaaacaaagactcagatgcagaaagaattgctt
gacacagaattggatttatataagaagatgcaggctggagaagaagtcactgaacttagg
agaaaatatacagaattacagctggaagctgctaaaagaggaattctttcatctggccga
ggtagaggaattcatacaagaggtcgaggtgcagctcatggacggggaagggggagaggt
cgaggacgaggcgtgcctgggcatgctgtagtggatcaccggcccagagcattggagatt
tctgcatttacagagagcgatagagaagatcttcttcctcattttgcgcaatttggagaa
attgaggattgccagattgatgactcttcactgcatgcaataattacattcaagacaaga
gcagaagcagaagcagctgcaattcatggagctcgcttcaaagggcaggatttaaaactg
gcatggaataaaccaataactaatatgtcagctgtggaaaccgaagaggttgaacctgat
gaagaggaatttcaggaagagtctttggtggatgactcattacttcaagatgatgacgaa
gaagaagaggacaatgaatctcgttcttggagaagatga
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