Arvicanthis niloticus (African grass rat): 117705022
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Entry
117705022 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 3-like
KO
K16503
cadherin-related family member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117705022
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Cadherin related
117705022
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GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Big_9
TcA_RBD
Motif
Other DBs
NCBI-GeneID:
117705022
NCBI-ProteinID:
XP_034353160
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Position
3:complement(98423207..98489354)
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AA seq
816 aa
AA seq
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MLSSHFLFVLLAASGLQAAPNFVVEIAGPLLENASDHTWVATVTMSLSSHTSLVGDPVIL
NASPTVHPFVLSHRSSYLWDLLITGVPKLDFEVVALYSLTIYAKDNHGATASQTIFVQIE
DVNEPPVFIGSLAQKNQVIEIYITEDTAHGTIIYRAAAKDPEGAVLEYSISPESSGFTID
STGAISSAAGFDFESDMRSFSLVIKVVDPGGLFATGNLKIFLVNVNDKDPTLACSLFNIE
NGVLSVTSTNSTLHHQVNITLDEEIPVGKMIAMCQAADEDNLGSLTFGLDTVDDYFVVDK
EKGTVVTTNRFDVEKTGFPSALSFSIKACDGDQRCAVIPVATYIHGINDNPPFCDQYLIR
YTGKEEIAKDTVVAKLSCHDLDKPPDTIHYAPSSGPVGSGQLFEQVPDAKNFIQVTKELD
YENPEVVAAGHMYEVMISVFDDLHPSHTVTVTILVEIAPDNDFSPKFQASHYVFSVPETS
GAFYKVGQVTAIDEDHPPDCLTYKIIHGDMQPVQKFWIHPFSGLIELTTQPDYESVRQYN
LTVEAVDCDRDYPRTAVTTVTVDIEDENDEAPVCTPNLYTAIISDNVIAGTNVNGLKLNC
HDRDSQDFEMRFEMASGNENLHFQLDPTRGSNTPKLIVKNPFNFESGAELQQQYHLVVHV
IDDNLQYGKAVKPKTGTVVIDIYVMRTSTPPPPTSSEQRKGLTIVYTAINTYKSSDWYVP
FIFTLTAVFFVGLVSWMCFLLWRYGNIKSKSPRMAREVAKSKPKGMKYIVGDRRQKEKEV
ITETRNKKLEVLSAGSLSMPPRPPGLLXGDECHPII
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttcccatttcctctttgtattgcttgctgcctcaggtcttcaagctgctcca
aattttgttgtggagattgctggccccctcctggaaaatgcctctgatcatacatgggtt
gccacagtcaccatgtctctctcatctcacacttctctggttggagatcctgttatcctc
aatgccagccccacagtgcatccttttgtgctgtcccacagatcctcatatctgtgggat
ttacttatcactggagtacccaagctggactttgaggtggtagcactctattccttgaca
atatatgccaaagacaaccacggggcaacagcatcccagaccatttttgtccagattgaa
gatgtgaatgagcctcctgttttcattgggtcacttgcccagaaaaatcaagttattgag
atttacatcacagaggacacggcccatggcaccatcatttacagagcagcagccaaggac
ccagagggtgctgtgttggagtactccatttccccagagagctctggtttcaccatcgac
agcactggggcaatttcctcggcagcaggtttcgattttgagagtgacatgagaagtttt
tcactggttattaaagtggttgatcctggaggactctttgctactggaaatctgaagatt
ttcctcgttaatgtcaatgataaggaccctactcttgcctgcagcttgttcaatattgaa
aacggggtcttgagtgttacctccacaaactcaactctgcaccaccaagtcaacatcaca
ctggatgaagaaattccagttgggaagatgattgcgatgtgccaggcagctgatgaagat
aacctgggaagtttaacctttgggctagatacagtggatgattattttgtagtggacaaa
gagaaggggaccgtggttacgactaaccgtttcgatgtggagaaaactgggtttccaagt
gctctatccttctctattaaggcttgtgatggtgatcagaggtgtgcagtgattcctgtg
gctacctacattcatggcattaatgataaccctcctttctgtgatcagtatctgattagg
tacacaggcaaggaggagattgcaaaagacacagttgttgctaagctctcatgtcatgac
cttgacaaacctcctgacacaattcattatgctccgagctctggtcctgtaggttctgga
caactctttgaacaagttccagatgccaaaaatttcattcaggttaccaaagagctggat
tatgaaaacccagaggtggttgcagcaggacacatgtatgaagtaatgatttcggtattt
gatgacctacatccatctcatacagtgactgtgacaatccttgtggagattgctcctgac
aatgatttcagccccaaatttcaagcctcgcactatgtattttcagttccagaaacatca
ggagctttctacaaagttggacaagtgactgccattgatgaggaccacccaccagactgt
ctgacatacaagataatccatggagacatgcagcctgtacaaaagttttggattcaccct
ttctctggactgattgaactcactactcagccggactatgagtcagtgaggcaatataac
ctcacagtggaagctgtggattgtgacagagattatccacgaactgcagtgaccacagtc
actgttgacattgaagatgagaatgatgaagcacctgtctgcacacccaatctatataca
gcaatcatctctgacaatgttattgctgggacaaacgtcaatggcctcaaactaaactgt
cacgacagagattcacaagattttgaaatgcgctttgaaatggcttctggaaatgaaaat
cttcatttccaattagacccaactcggggttcaaatactccaaaattaattgtgaagaat
cctttcaactttgaatctggagccgaactgcagcagcaatatcatcttgtggttcatgta
atcgatgacaacctgcaatatggcaaagctgtcaagcccaagacaggaactgttgtcata
gatatctatgtgatgagaaccagcacaccacctcctccaaccagttctgaacaaagaaaa
ggcctgaccattgtgtacacagctatcaacacgtacaaaagcagtgactggtatgttcct
ttcatcttcactctgacagctgttttctttgttggattggtttcttggatgtgttttcta
ctctggagatatggaaacattaaaagcaagtctccgagaatggccagggaagtcgccaag
tcaaaacccaaaggaatgaaatatattgtaggagatagaagacaaaaagaaaaagaagtt
atcacagaaaccagaaacaaaaaactagaagtgttatcagctggctccctctcaatgccc
ccccgacccccaggcctcctgtaaggagatgagtgccatccaatcatctga
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