Arvicanthis niloticus (African grass rat): 117705027
Help
Entry
117705027 CDS
T08817
Symbol
Btrc
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04114
Oocyte meiosis
anu04120
Ubiquitin mediated proteolysis
anu04218
Cellular senescence
anu04310
Wnt signaling pathway
anu04340
Hedgehog signaling pathway
anu04390
Hippo signaling pathway
anu04710
Circadian rhythm
anu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117705027 (Btrc)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117705027 (Btrc)
04340 Hedgehog signaling pathway
117705027 (Btrc)
04390 Hippo signaling pathway
117705027 (Btrc)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
117705027 (Btrc)
04218 Cellular senescence
117705027 (Btrc)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
117705027 (Btrc)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
117705027 (Btrc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117705027 (Btrc)
03036 Chromosome and associated proteins [BR:
anu03036
]
117705027 (Btrc)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117705027 (Btrc)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117705027 (Btrc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_DCAF12
NBCH_WD40
F-box
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
F-box_5
DUF4508
DUF6188
Motif
Other DBs
NCBI-GeneID:
117705027
NCBI-ProteinID:
XP_034353176
LinkDB
All DBs
Position
1:151759597..151930081
Genome browser
AA seq
619 aa
AA seq
DB search
MDPAEAVLQEKALKFMAAVPAGGYWRNNKKCSMPRSLWLGCSSLADSMPSLRCLYNPGTG
ALTAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSCARLCINQETVCLTSTAMKTENCV
AKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHG
HINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK
KLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDENAPPNSFYRALYPKIIQDIETIESNW
RCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV
LCLQYDERVVITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA
VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK
RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDG
KIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP
AAHAEPPRSPSRTYTYISR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacccggcagaggcggtgctgcaggagaaagcgctcaagtttatggctgcagttccg
gctggtggatattggaggaataataaaaagtgctctatgcccaggtctctgtggctgggc
tgctccagcctggcggacagcatgccttcgctgcgatgcctgtataacccagggactggc
gcactcacagctttccagaattcctcagagagagaagactgtaataatggcgaaccccct
aggaagataataccagagaagaattcacttagacagacttacaacagctgtgccaggctc
tgcataaaccaagagacagtatgtctaacaagcactgctatgaagactgaaaactgtgtg
gccaaaacaaaacttgccaatggcacttccagcatgattgtgcccaagcagcggaaactc
tcagcaagctatgagaaggaaaaggagctgtgtgtcaagtattttgagcagtggtcagag
tctgatcaagtggagtttgtagaacaccttatatcgcaaatgtgtcattaccagcatggg
cacatcaactcctatctaaagcctatgctgcagagagatttcataactgcgctgccagca
aggggtctggaccatattgctgagaacattctgtcatacttggacgccaagtcactgtgt
gctgctgagcttgtgtgcaaggaatggtaccgtgtgacgtcggacggcatgctgtggaag
aagctcatcgagaggatggtcaggacagactctctgtggcgaggcctggcagagcgcaga
gggtggggacagtacttattcaaaaacaaacctcctgatgagaatgctcctcccaactcc
ttttatagagcgctttatcctaaaattatacaggacattgagacaatagagtccaactgg
agatgtgggcgacatagtttacagagaatccactgccggagtgaaacaagtaaaggggtt
tactgtttacagtatgatgaccagaagatagtcagcggccttcgagacaacaccatcaag
atctgggataaaagcacactggaatgcaagcggattctcacaggccacacaggctctgtc
ctgtgtctgcagtacgatgagagggtggtcatcacgggctcctcagactccaccgtcaga
gtgtgggatgtaaatgcgggtgagatgctaaacacattgattcaccactgtgaagccgtt
ctgcacttgcgcttcaataatggcatgatggtgacctgctccaaagaccgctccattgct
gtgtgggacatggcttccccaaccgacatcaccctcaggagggtgctggtgggacaccga
gctgcagtcaatgttgtagactttgatgacaagtacatcgtttctgcctctggagataga
accataaaggtgtggaacacaagtacctgtgaatttgtaaggaccctaaatggtcacaag
cgtggcattgcctgtttgcagtacagagacaggctggtggtgagcggctcatctgacaac
accatcaggctgtgggacatagagtgtggagcgtgtttgcgagtgttggaaggccatgag
gaattggtacgctgtattcgatttgataacaaaaggatagtgagtggggcctatgatgga
aaaattaaagtgtgggaccttatggctgctttggacccacgtgctcctgcagggactctt
tgtctacggacccttgtggagcattctggaagagtgtttcgactccagtttgatgaattc
cagattgtcagtagctcacatgatgacacgattctcatctgggacttcctaaatgacccg
gctgctcatgctgagccgccccgctccccttctcggacatacacctacatctccagataa
DBGET
integrated database retrieval system
