Arvicanthis niloticus (African grass rat): 117705041
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Entry
117705041 CDS
T08817
Symbol
Dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117705041 (Dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117705041 (Dcp1a)
03036 Chromosome and associated proteins [BR:
anu03036
]
117705041 (Dcp1a)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117705041 (Dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
117705041 (Dcp1a)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117705041 (Dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
117705041
NCBI-ProteinID:
XP_034353210
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All DBs
Position
3:82873049..82920489
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AA seq
602 aa
AA seq
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MALSCSTVCPCWRGSALRSKMELLSRAEQEMSLAALKQHDPYITSIADLTGQVALYTFCP
KANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNA
SLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDQRPIDILEM
LSRAKDEYERNQMGGSNISSPGLQPSTQLSNLGSTETLEETPSGSQDKSAPSGHKHLTVE
ELFGTSLPKEQQPTAMGLESEDTDKLLGDASQKEPSSFLSFPFEQSGGAPQSENLGVHSA
THHTVQPEGSAPVLITPASIAQSGDKRPPSYALPLSPVLSPTLPAEAPTTQVPHLPRNST
MMQAVKTTPRQKSPLLNQPVPELSHSSLIASQSPFRAPVSLANPAGTALPSVDLLQKLRL
TPQHDQIQAQPLGKGVMAPNFSSAAGQLATPESFIEPSSKTAAARAAASSLSNMVLAPTL
QSMQQNQDPEVFAQPKVLPSAIPIAGPPLVTATTTAVSSVLLSPSVFQQTVPRSTDLERK
ASSPSPLTVGTPENQRKPSIILSKSQLQDTLIHLIKNDSGFLSMLHEVYLQVLTKNKDNH
NL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcctgttctacagtctgtccctgctggaggggctcggctctgagatccaag
atggagttgttgagtcgagctgagcaagagatgagtctggcggccttgaaacaacacgac
ccctatatcaccagcatcgcagacctcacgggccaggtcgccctgtacactttctgcccc
aaagccaaccagtgggagaagacagatatagaagggacgttatttgtataccgaaggtca
gcttcaccttaccatggctttaccattgtcaaccgactgaacatgcataatctggttgaa
ccagtgaataaagatttggaatttcagctccatgaaccatttcttctgtatagaaatgca
agtttgtcaatatacagtatctggttttatgacaagaatgactgtcatcgcatagcaaaa
ctcatggctgatgtggtagaagaggagacacggcgttcccagcaggctgctcgagataaa
caaagtcccagccaggccaatggctgcagtgaccagaggcccatagatatcctggagatg
ctgagcagagccaaggacgagtatgagaggaatcagatgggcggctcaaatatctccagt
cctgggctacagccaagcactcagctctccaatctgggaagcactgagactctagaagag
acaccctctgggtcacaagacaagtctgctccatctggtcacaaacatctgacagtagaa
gagttatttggaacctccttgccaaaggaacaacaaccaacggctatgggtctagagtca
gaagacacagacaagctgctaggagatgcatcacagaaagagcccagctcattcctctca
tttccctttgagcagtcagggggtgcccctcagtctgaaaacctgggtgtccattctgcc
actcaccacacagtccagcctgaaggcagcgccccggtgctgattactcccgcctccatt
gcacagtcgggtgacaagcgtcccccaagctacgcgctcccgctgagccccgtcctcagc
cccactctgccggctgaagctcctaccacacaggttccccacttacctcggaatagcacc
atgatgcaagcagtaaagaccacacctaggcagaaatctccactcctgaaccagccagtc
cctgagctaagccacagcagtctgattgctagccagagccccttcagagccccggtgagt
ctggcaaatccagctggcacagccctcccaagcgttgatctgctccagaaactcaggttg
accccacagcatgaccaaatacaggcacagccgcttggaaaaggtgtgatggcacccaac
ttttcttcggcagctggccaactggccacccctgagagcttcatagagccttcctctaag
acagcagcagcaagagccgcagcctcctccctgagcaacatggtgcttgctccaaccctc
cagtctatgcagcaaaaccaggatcctgaagtatttgcccagcctaaggtgttacccagt
gccatcccgattgcaggccctccattggttactgcaacaaccacagccgtatcctcagtc
ctgctgtcccccagtgtgttccagcaaacagttcccaggtccacagacctagagaggaaa
gccagctccccttctcccctcactgttggaacaccagaaaatcagagaaagccttccatt
attctcagcaagtctcagctccaggacacactgattcatctaataaagaatgactccggc
ttcctcagtatgcttcatgaagtttatctgcaggttctgaccaagaacaaagataaccac
aacctatga
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