Arvicanthis niloticus (African grass rat): 117705151
Help
Entry
117705151 CDS
T08817
Symbol
Vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04510
Focal adhesion
anu04517
IgSF CAM signaling
anu04518
Integrin signaling
anu04519
Cadherin signaling
anu04520
Adherens junction
anu04670
Leukocyte transendothelial migration
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05100
Bacterial invasion of epithelial cells
anu05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117705151 (Vcl)
04518 Integrin signaling
117705151 (Vcl)
04519 Cadherin signaling
117705151 (Vcl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117705151 (Vcl)
04520 Adherens junction
117705151 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117705151 (Vcl)
04810 Regulation of actin cytoskeleton
117705151 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
117705151 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117705151 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
117705151 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117705151 (Vcl)
04147 Exosome [BR:
anu04147
]
117705151 (Vcl)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117705151 (Vcl)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117705151 (Vcl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
117705151
NCBI-ProteinID:
XP_034353369
LinkDB
All DBs
Position
3:74061871..74158148
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNAMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacgcgcacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaacctcgtccgggttggaaaagag
accgttcagaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgaaaatgcttgcaccaagcttgttcaggcagcccagatgcttcagtcagacccatac
tcggttcctgcacgggattacctcattgacggctctaggggaatcctctctggcacatct
gaccttctgcttacctttgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtagtagagactatggaagacttggtcacttac
acaaagaatcttgggccaggaatgactaagatggccaaaatgattgatgaaagacagcag
gagttgactcaccaggaacaccgagtgatgctggtgaacgcaatgaacactgtcaaagag
ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa
attaacgagatcattcgtgtattacaactcacttcctgggatgaagacgcctgggccagc
aaggacactgaagccatgaagagagcgctggcgtccatagattccaaattgaaccaggcc
aaaggttggctccgtgaccccaatgcctccccaggggatgctggtgagcaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgacctccgagcc
agaggacaaggagcctcaccagtggctatgcagaaggcccagcaagtgtctcaggggctc
gacgtgcttactgcgaaagtggaaaatgcagctcggaagctggaagccatgacgaactca
aagcagagtattgcaaagaagattgatgctgcccagaattggctggcagatccaaatggt
ggacctgaaggagaagaacagattcgaggggctttggctgaagctcggaagattgcagaa
ttatgtgatgatcctaaggagagagatgacatcctccgctcccttggagagatagctgct
ctgacctctaaattaggagacttgcgaagacaggggaaaggagactccccagaggctcga
gccttggctaaacaagtggcaacggcgttacagaacctgcagaccaaaaccaacagggcc
gtggctaacagcagacctgccaaggcagctgtccatctcgagggcaagattgaacaggca
cagcgatggattgacaatcctacagtagatgaccgtggagttggtcaggctgccatccgt
ggccttgtggctgaagggcatcggctggccaatgtcatgatgggaccttatcgccaagat
cttcttgccaagtgtgaccgtgtagaccagctgacagctcagctggctgacctggctgcc
cgaggggagggggagagtccccaggcaagagcacttgcatctcagcttcaggactcccta
aaggatcttaaagcccagatgcaggaagctatgactcaagaggtgtctgatgttttcagt
gatactacaactcccatcaagctgttggcagtggcggccactgctcctcctgatgcgccc
aatagggaagaggtatttgacgagagggcagccaactttgagaaccattcaggaaggctt
ggagccacagcagagaaggcagctgctgttggtactgccaataaatcaacagtggaaggc
attcaggcatctgtgaagacagcccgagaactcactccccaggtcatctcagctgctcga
atcttactgaggaaccctggtaatcaagctgcttatgaacattttgagaccatgaagaac
cagtggattgataatgttgaaaaaatgacagggctggtggacgaggctattgataccaaa
tctctcttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggccaatattcagcctcagatgctggtcgctggagcaaccagtattgcccgccgggcc
aaccggattctgctggttgctaagagggaggtagagaactctgaggatccaaagttccga
gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccccatggtgatggat
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctccaccagaccttgaacagctccgactaactgatgagctggctcct
cctaaaccacctctgcctgagggtgaagtccctccacccaggcccccaccaccagaagag
aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatgatg
gccgccaggcagctccatgatgaagctcggaaatggtctagcaagggcaatgacatcatt
gcagcagccaagcgcatggctctgctgatggcagagatgtctcggttggtaagagggggc
agtggtaccaagcgggcacttattcaatgtgccaaggatattgccaaggcctctgatgag
gtgacgaggttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaat
ctcttacaggtctgtgagcgaatcccaactataagcacccagctcaaaatcctgtctaca
gtgaaggctaccatgctgggccggaccaacatcagtgatgaggagtctgagcaggccaca
gagatgctggttcacaatgcccagaacctcatgcagtctgtgaaggagactgttcgagaa
gcagaagctgcttcaatcaaaattcgaacagatgctggatttaccctgcgctgggtcaga
aagactccctggtaccagtag
DBGET
integrated database retrieval system
