Arvicanthis niloticus (African grass rat): 117705196
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Entry
117705196 CDS
T08817
Symbol
Apex1
Name
(RefSeq) DNA repair nuclease/redox regulator APEX1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117705196 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117705196 (Apex1)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117705196 (Apex1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117705196 (Apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117705196
NCBI-ProteinID:
XP_034353435
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All DBs
Position
3:complement(67177970..67180213)
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AA seq
317 aa
AA seq
DB search
MPKRGKRAPAEDGEEPKSEPETKKSKGAAKKTEKEAAGEGPVLYEDPPDQKTSPSGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgggggaagagagcgccggccgaagacggggaagaacccaagtccgagcca
gagaccaagaaaagtaagggagcagcaaagaaaactgagaaggaggccgcaggagagggc
cctgtcctgtatgaggaccctccagatcagaaaacctcacccagtggcaaatctgccaca
ctcaagatatgctcctggaatgtggacgggcttcgagcctggattaaaaagaaaggtttg
gattgggtaaaggaagaagcaccagacatcttgtgcctccaagagaccaaatgctcagag
aacaaactcccggctgaactgcaagagctgcctggactcacccatcagtactggtcagct
ccatcagacaaagaagggtacagtggtgtgggcctactttcccgccagtgcccactcaaa
gtctcttatggcattggtgaggaagaacatgatcaagaaggccgggtgatcgtagctgaa
tttgagtcctttgtcttggtaacagcgtatgttcccaacgcaggcaggggtctggtaaga
ctggaataccgacagcgttgggatgaagcctttcgaaagtttctaaaggacttggcttcc
cgaaagcctcttgtgctatgtggggatctcaatgtggctcatgaagaaattgaccttcgt
aaccccaaaggaaacaaaaagaatgctggctttactccccaggagcgccaaggctttggg
gaattgctacaggctgtaccactggctgacagcttccggcatctctaccccaacactgcc
tatgcttacactttctggacttacatgatgaatgcccgctctaagaatgttggttggcgc
cttgattactttttgctgtcccactctcttttacctgcattgtgtgacagcaagatccgg
tccaaggctcttggcagtgaccactgtcccatcaccctttacctagcactgtga
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