Arvicanthis niloticus (African grass rat): 117705210
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Entry
117705210 CDS
T08817
Symbol
Cdhr1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117705210 (Cdhr1)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Cadherin related
117705210 (Cdhr1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
117705210
NCBI-ProteinID:
XP_034353452
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Position
3:complement(89268225..89288982)
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AA seq
859 aa
AA seq
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MRRSPLAALVLGLLHVYLAQANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGDPISYHISFDPSTRSVFSVDPNFGNITLVEELDREREDEIETVISISDGLNLVAEK
VVILVTDANDEAPRFIQEPYIIRVPENTPAGSSIFKVHAEDKDTGSGGSVTYFLQNLHSS
KFTIDRHSGVLRLQAGATLDYEKSRAHFITVVAKDGGGRLRGADVVFSTTTTVTINVEDV
QDMAPIFVGTPYYGYVYEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGIFEINETS
GAISVLQSPAQLRREVYELHVQVTEVNSPGSSAAQATVPVTIRIVDLNNHPPTFYGESGP
QNKFELSMFEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKSKLLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIA
RIPENAPGGSNVVAVTAMDPDTGPWGKVQYSIYGTGSDLFLIHPSTGLIYTQPWASLDAE
STSRYNFYVKAEDMDGRYSLAEVFVTLLDVNDHYPQFVQSVQEKIMVLGTPLKIEATDQD
AEEPNNLVDYSITHAEPVNVFDIDEHTGEIRLKNSIRSLEALRNITPSGDYSWSLQVQAK
DRGSPSFSTTALLKIDITDTERLSRGSMAAFLIQTKDNPMKAVGVLAGVMAIVVAITVLI
STATFWRNKRSNKVLPVRRVLRRRPSPAPHTVRIEWLKFKRAKAASKFILKEDPPNENCN
NSSVGVMVPPRAPALPPPPKMASSMVVQQTVPTVSGSLTPQPSQQLPTPKPLGGPVQSSL
VSELKQKFEKKSLGNKAYV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagcccactggccgccctggtcctggggctgctgcacgtttacctagcccag
gccaactttgcccctcacttctttgacaatggagtgggcagcaccaacggaaacatggcc
ctgttcagcctcccagaagacactcctgtaggttctcatgtgtacaccctaaatgggact
gaccccgagggagaccctatttcctaccacatcagctttgaccccagcactagaagtgtc
ttttctgttgaccccaattttggaaacatcactctggtggaagagctggacagagagagg
gaagatgagattgaaaccgtcatcagtatttccgatggcctgaacctggtggcagagaag
gttgtgatactagtgacagatgccaatgatgaagcacccaggttcatccaggagccttac
atcatccgggttccagagaacacacctgctgggagcagcatctttaaagtccacgcagag
gacaaggacacaggctctggaggcagtgtcacctacttccttcagaacctacactcctcc
aagttcaccatagaccgtcacagcggggtgctgcgactccaggctggggccacactggac
tatgagaagtcgagagctcatttcatcactgtggttgccaaggatggtgggggcaggctt
cgaggggctgacgtagtgttctcaactaccaccactgtcaccatcaatgtggaagatgtt
caggacatggcccctatcttcgtgggtacaccctactatggttatgtgtacgaggacacc
ctcccgggctcggaggtgctgacggtggttgccatagatggagatcgaggcaaacccaac
cacatcctttacaggctcctgaacgagagtgatggaatctttgaaatcaatgagacatct
ggagccatctccgtccttcagagccctgcccagctccgaagagaggtttatgagcttcat
gtacaggtgacagaggtcaactctccaggaagctcagctgctcaggccacagtcccagtg
accatcaggatcgtggacctcaacaaccaccctccaaccttctatggagagagtgggccc
cagaacaagtttgaactatcaatgtttgagcatccaccccagggagagatcctccgtgga
ctcaagatcactgtcaatgactctgaccagggagccaatgccaaattcaatttacggctg
gtgggacctggaggcatcttccgagtggtgccacagacagtcctgaatgaagcccaagtg
acgatcatagtggaaaactcagctgccattgactttgaaaagtctaagctgttaaccttc
aagctcctggccattgaagtgaacaccccggagaagttcagttctacagcagacattgtg
atccagcttctggacaccaatgataatgtccccaagttcacgtcacactactacattgcc
aggatcccagagaatgctccagggggctccaacgtggtggctgtcacagctatggatcca
gatacaggaccatggggaaaagtccagtattccatctatgggaccgggtcagacctgttc
ttgattcatccatccactgggcttatctacactcagccctgggctagcctggatgctgag
agcacttcgaggtacaacttttatgtgaaagcagaagacatggatgggaggtacagcctg
gctgaggtgtttgtcactctgttggatgtcaatgaccactacccccagtttgtacagagt
gtccaggagaagataatggtgctggggaccccactgaaaattgaggccacagatcaggat
gcagaggagccaaacaacttagtagactactccattacccatgcggagccagtcaacgtg
tttgacattgatgaacacacgggggagatcaggctcaagaattccatccgctccttggag
gccctacgcaacatcacacccagcggggactactcatggtccttgcaggtgcaggccaag
gaccgaggctctccatctttcagcacaacagccttactcaagatcgacattacagacaca
gagaggctgtccagaggctccatggctgccttcctgattcagaccaaggacaatcccatg
aaggctgtgggtgtactggctggtgtgatggccattgttgtggccataactgtcctcatc
tccacagccaccttctggcgtaacaagaggtctaacaaggtcctgcctgtgcggcgtgtg
ctccgtagaaggcccagccctgcaccccacacagttcgaatagagtggctcaaattcaag
agggccaaggctgctagcaagtttatactcaaagaggatcctcccaacgagaactgcaat
aacagcagcgtgggagtcatggttcccccaagagctccagctctcccgccacctcccaaa
atggcatccagtatggtggtccaacagacagtgcctactgtctctggatccctcacccca
cagccatcccagcagttacccactcccaagcccctgggaggccctgttcagtcttctttg
gtgtcagagctcaagcaaaagtttgagaagaagagtttaggcaacaaggcttacgtctag
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