Arvicanthis niloticus (African grass rat): 117705241
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Entry
117705241 CDS
T08817
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117705241 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anu01007
]
117705241 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117705241 (Farsb)
Enzymes [BR:
anu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117705241 (Farsb)
Amino acid related enzymes [BR:
anu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117705241 (Farsb)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117705241 (Farsb)
Prokaryotic type
117705241 (Farsb)
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
117705241
NCBI-ProteinID:
XP_034353532
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All DBs
Position
3:105576798..105642824
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAQGASDV
VLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPIYKRVMPKGEIQKLIITEETAKVRPF
AVAAVLRNIRFTKDRYDSFIELQEKLHQNICRKRTLVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGD
HSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAAEVVSPNGKSSTFP
ELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIH
ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSSKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEESGGYVIKASTG
SAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaaacgcgacctgctcttccaggctctgggccggacctacact
gatgaagaatttgacgaactgtgttttgaatttggtctggaacttgatgaaattacttct
gagaagcaaatcataagcaaggaacaaggtaatgtgaaggcacagggggcctcggatgtt
gtgctttacaagattgatgtccctgccaacagatatgatctcctgtgtctggaaggattg
gctcggggactccaagtcttcaaagaaaggataaaagctccaatatataaacgagtaatg
cctaagggagaaatccaaaaactgattatcacagaagagacagctaaagtgcgccctttt
gctgtggcagcggttctccggaacatcagattcactaaagaccgatatgacagcttcatc
gaacttcaggagaaactacaccagaatatttgcagaaaaagaacattggttgctattgga
actcatgacttggacactttatcaggcccatttacttacactgcaaaacgtccttcagat
atcaaattcaaacctctgaataagaccaaggagtatacagcttgtgaattaatgaacatt
tacaagactgacaatcaccttaaacattatttacatatcattgaaagtaagcctctgtat
ccagttatctatgacagcaatggtgtggtcctgtcaatgcctccaattataaatggggat
cattcaaaaataacagtaaatactaggaatatatttattgaatgcacagggactgacttc
actaaggcaaaaattgtgcttgacattattgtcaccatgttcagtgaacactgtgaaaat
cagtttacagttgaagcagctgaagtagtttctcctaatggaaaatcaagtacctttcca
gagctgccttacagaaaggagatggtgagagccgatttaattaacaagaaagttggaatc
agagaaactcctgcaaatcttgccaagctcctgactaggatgtgtctaaagtcagaagtc
ataggtgatggcaatcagattgaggttgaaattcctccgaccagagctgatgtcatccat
gcatgtgacattgtggaggatgcagctatcgcttatggctataacaacattcagatgact
ctgccgaaaacatacaccatagctaatcaatttcctctcaacaagctcacagagctcctc
agacttgacatggctgctgctggcttcaccgaagcactgacttttgctctgtgctcccaa
gaagatattgctgataaacttggcttggatatctctgcaacaaaggcagtccacataagt
aatcccaaaaccgccgagttccaggtggcgcgcactacccttcttcctggccttctgaag
accattgcggcaaaccggaagatgccccttcctctcaaattgtttgaaatctctgacatt
gtagtaaaagattctagcaaagatgtaggtgcaaaaaactacaggcatctctgtgctgtt
tattacaacaagaatcctggttttgagatcatccatggactgctggacagaattatgcag
ctgctggatgtgcctcccggtgaggagagcgggggctacgtgatcaaagcatccacaggt
tctgcattcttccctggacggtgtgctgagatctttgtcgggggacaaagcatcgggaag
ctaggcgtcctccatcctgatgttatcaccaaatttgagctgaccatgccctgttcctct
ctggaaatcaatattgagccctttttgtga
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