Arvicanthis niloticus (African grass rat): 117705255
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Entry
117705255 CDS
T08817
Symbol
Zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117705255 (Zc3h13)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117705255 (Zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
117705255
NCBI-ProteinID:
XP_034353570
LinkDB
All DBs
Position
3:complement(44773570..44834457)
Genome browser
AA seq
1734 aa
AA seq
DB search
MSKIRRKVTVENTKTISESTSRRPSVFERLGPSTGSTTETQCRNWLKTGSCLYGNTCRFI
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDSESQKRNTEESSSPVRKESSRGR
HRDKEDIKIVKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIQKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKASSAGKKERKAAVV
ASPLLDPQRNSKSNQSKKKGPRTPSPPPPILEDIILGKKYKEKYKVKDRIEEKPRDGKDR
GRDFERQREKRDKPRSSSPGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQR
TLTPSLRRSASPYPTHCLSSPQRKQSPPRHRSPMREKGRHEHERTSQSHDRRHERREETR
GKRDREKDTREERESEHDHRDDREPRDSRDRRDTRDRRELRDSRDMRDSRDMRDYSRDTK
ESRDPRDSRSARDIHDYRDREARDARDGRDARDIRDVRDVRDARDVRDVRDVRDVRDVRD
VRDVRDVRDVRDVRDVRDVRDVRDVRDVRDVRDVRDVRDGHRKEDVYQEEARNYGRNHLR
EESSRVELRNDSRNESRSEIRNDRMGRSRGRGPDLPEKGSRGTRGSQMDSHSSGSNYHDS
WETRSSYPERDRYPERDTRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRSEELD
RDERREERRIDRVDERRDERVRDRDRDREREREREREREREREREKERERELERERARER
EREREKERERERERERDQRDRDHDREREREREREREKEREREREERERERERERERERER
ERERERERERERERAREREKERERQREWEDKDKGRDDRREKREDVHVREDRIPRDSHEER
KSKKRYRNEGSPSPRQSPKRRREHSPDSDTYHSGDDKNEKHRLLSQVVRPQESRSLSPSH
LTEDRQGRWKEEDRKSERKESSRRYEEQELKEKLSCGDRQREQGESVDGSRVRAQDLLSH
RQAEDRDRDGSDRAHDEKKKAKAPKKPVKKKKEEDVGIERGNLETHEDSQVFSPKKGQKK
KNIEKKRKRSKGDSDVSDEEAAPQSKKKRGPRTPPLAIKEELIDISTDKDGVLEDPLKKE
DTAFSDWSDEDVPDRTEGMEGEHTAATATPGSTPSPLSSLLPPPPPVAAASTASAALAAS
ASSATTSATASSSAATSNTNGSEDSHRKCHRTRGEKVEVSHVTLEDAPHRKLVDQKRSSS
LGSNRSHRSHTSGRLRSPSNDSAHRSGDDQGSRKRVLHSGSRDREKTKSLEITGERKSRI
DQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRER
ERDRRDPRQREWDREADKEWPRTRDRDRLRERERDRDKRRDLDRERERLIADPMERDRER
DRTFETSQLESVKRSEVKLESEHERDLEGSSRDSVALDKERMDRDLGSVQGFEDVNKAER
TESLEAGDDESKLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQEEEKMPDPLD
VIDVDWSGLMPKHPKEPREPGAALLKFTPAAVLLRVGISKKLAGSELFTKVKETCQQLVE
KPKDADSLFEHELGALNMAALLRKEERANLLSDLGPCCKALCFRRDSAIRKQLVKNEKGT
VKQAYTNTPMVDNELLRLSLRLFKKKTTCHTPGQEKTEDGKLAPCSIQQELCVS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaggaggaaggtcacagtggaaaacaccaagaccatatctgagagcaca
tcccgaagacctagtgtatttgagaggcttggacccagcactggaagcacaacagagaca
cagtgccgtaactggctgaagactggcagctgcctctatggaaacacatgtaggttcata
cacggcccttcacctcgtgggaaaggttacagcagcaattacagaaggtcaccagaaaga
cccacaggtgatctcagagaaagaatgaagaataagcgtcaggatgtggattctgaatcc
cagaaacggaacacagaggaatcatcctcacctgttaggaaagaatcttcaagagggaga
catagagacaaagaagacataaaaattgttaaggagagaactccagaaagcgaagaagaa
aatgtagaatgggaaactaacagagatgattctgacaatggagatattaattatgattat
gttcatgagttatcattggaaatgaagcgtcagaaaatacagagagaattaatgaagttg
gaacaagaaaacatggataaaagagaagaaattattattcaaaaggaggtttccccagaa
gtggttagatcaaaattgtctccatcaccttctctgagaaagtccagtaaatcgccaaag
cgaaagtccagccccaaggcatcttcagctggcaagaaagagcggaaggctgctgtggtg
gcttctccgctgttggacccgcagagaaactcaaaaagcaaccaaagtaaaaagaaagga
ccacgcactcctagtccacctcctcctatactagaagatatcattctggggaaaaagtac
aaagaaaagtataaagtgaaagacaggatagaagagaaaccgagagatggaaaggacaga
ggacgggattttgaaagacaaagagaaaaacgagacaagccaaggtcttcctccccggga
cagcaccattctcctctgtcttctagacatcattcctcgtcctcacagtcagggtcatct
attcagagacactctccttctcctcgtcggaagagaactccttccccatcctaccagagg
actttaactccatctttacgacgatctgcctctccttatccaacccactgtctgtcttct
cctcagagaaaacaaagtcctccaagacatcgctctccaatgcgagagaaagggaggcat
gaacatgaacggacttcacagtcacatgatcggcgtcacgaaaggagggaagaaactcga
ggcaaaagggatagagaaaaagacaccagagaagagcgagagtctgaacatgaccacagg
gatgacagagaaccacgagacagccgggaccggagagacactagagaccgcagggaactt
agagactccagagatatgcgggattccagagacatgagggattatagcagagataccaag
gagagccgtgatcctagagattcccggtcagctcgggatatccatgactacagggaccgt
gaagctcgcgatgctcgggatggtcgcgatgctcgggatattagggatgtgcgggatgtc
cgggatgctcgggatgtccgggatgttcgggatgtccgggatgtccgggatgtccgagat
gtgagggatgtccgggatgtccgggatgtccgagatgtccgggatgtccgggatgtccgg
gatgtccgagatgtccgagatgtccgggatgtccgagatgttcgggatgttcgggatggt
catcgaaaggaggatgtataccaggaagaagcccgcaattatggcagaaaccacctgaga
gaagagagttctagagttgaactaagaaatgactctagaaatgagtctcgaagtgaaatt
agaaatgaccggatgggcagaagcaggggaagaggtccagacctacctgaaaagggaagt
cgaggcacaagaggttcccaaatggatagccacagtagtggcagcaactaccatgacagc
tgggaaactcgaagtagctatcctgaaagagacagataccctgagagagacactcgagat
caagcaagggattcttcctttgagagaaggcatggagaaagagaccgtcgggataacaga
gaacgagatcaaagaccaagctcacctattcgccatcagggaaggagtgaggagcttgat
cgagatgaaagaagagaggaacgaagaatagacagagtggatgagagacgagacgaaaga
gtcagagacagagatagggatcgagagcgagaaagggagagggagagagagcgggagcga
gagcgggagcgagaaaaggaaagagaaagagaactagaaagagagagagctagagagcgg
gaaagagagagagagaaagagagggagagggagcgagaacgagaaagagatcagagagac
cgtgaccatgatcgagagcgagaaagagagagggagcgagagagggaaaaagaacgggag
cgagagcgagaagagagagaaagggagagagaaagggagcgggagagagagagggaacgg
gagcgggagagagagcgagaacgggagcgagagcgagaaagggccagagaaagagaaaaa
gaacgagaacggcaacgagagtgggaagataaagacaagggacgcgatgaccggagggag
aagcgcgaagatgttcatgttcgagaggacaggatccccagagacagccacgaggagagg
aagtccaagaagcgctatagaaacgaagggagtcccagcccccggcagtcccccaagcgc
cggcgggagcattctcctgacagtgacacctaccacagtggggatgacaaaaatgaaaag
catagactcttgagccaggtggtacggccacaggaatctcgttctctcagcccgtcccac
ctcacagaagataggcaaggtagatggaaagaggaagatcggaaatcagaaagaaaggaa
agttcaaggcgctacgaagagcaagaactcaaagagaagctttcttgtggtgacaggcaa
agggagcagggagaaagcgtggacggctcgagagtgcgcgcacaggatctcctcagccat
cgccaggccgaagaccgggaccgcgacgggtctgatcgagcccatgatgaaaagaaaaaa
gcaaaagctccaaagaaacctgtaaagaaaaagaaggaggaggatgttggaatagagagg
ggcaaccttgagacacatgaggatagtcaggtgttttcaccaaaaaaaggacagaagaag
aaaaacattgaaaaaaagcgtaaaagatccaaaggtgattctgatgtttctgacgaagag
gcagccccgcagagtaagaagaagagaggtccacgcacacccccactggccatcaaggag
gagctgattgacatttccactgacaaggatggtgtcctcgaggatccactgaagaaagaa
gatacagcctttagtgactggtctgatgaggatgtgcctgaccgtacagaggggatggaa
ggggagcacaccgcagccactgccactcctggtagcaccccttccccactgtcttctctt
cttcctcctccgccccctgtggccgctgccagtactgcatcggctgctcttgctgcctca
gccagttctgcaaccacctctgccacggcctcaagctctgcagccacctccaataccaat
ggcagcgaagactcacatagaaagtgccacaggacacggggggagaaggtagaggtgtct
catgtgaccctggaagacgcaccacatcgcaagctggtggatcaaaaaagaagcagcagc
ctcggaagcaatagaagccaccgcagccacacctctggtcgcctacgctccccatctaat
gattctgcgcatagaagtggggatgaccagggtagtcggaagagagtgctccatagtggc
tccagagatagagaaaaaacaaaaagcctagaaatcacaggagagagaaaatctaggatt
gatcagttaaagcgtggagaacccagtcgaagtacttcttcagatcgtcaggattccaga
agccacagctcaagaagaagctctcctgagtcggatcgacaggttcactcaaggtcaggg
tcatttgacagtcgagaccgacttcaagaacgagataggtatgagcatgacagagagcgg
gagagggaccggagagaccccagacagagggaatgggaccgggaagctgataaagagtgg
ccacggaccagagaccgagatagacttcgggagcgagagagagaccgagacaaaaggaga
gacttggacagagaaagagagagactgattgctgaccccatggaaagggacagagaacga
gataggacttttgagacgtctcagttggaatctgtgaaacgaagtgaagtcaaattggag
agtgaacacgagagagatctggaaggcagctctcgggactctgtggccttggacaaagaa
aggatggacagagacctggggtctgtgcaggggtttgaagatgtgaataaagctgagaga
acagagagtctggaagcaggagatgatgaatccaagttagatgatgcacattcattggga
tctggtgctggggaaggatatgagcccatcagtgatgacgagctagatgaaattctggca
ggggatgcagaaaagagagaggaccagcaggaagaggagaagatgccagatccattagat
gtgatagatgtggactggtctggactaatgccaaagcatccaaaagaaccgagagagcct
ggagctgcactcttaaagttcacgcctgctgccgtcctactgcgagttgggatttctaaa
aaattggctggttctgagctctttaccaaagttaaagaaacatgtcaacaacttgtagaa
aaacccaaagatgcagacagccttttcgaacatgaactaggggctctcaacatggctgct
ttacttcgaaaagaagagcgagcgaatcttcttagtgacctgggaccatgttgtaaagca
ttgtgtttcagacgcgattctgcaatccggaagcagcttgtgaagaatgaaaagggaact
gtgaagcaggcgtacacaaacactccaatggtagacaatgagctacttcggctaagtctc
cggttatttaagaagaagaccacctgccacacccctggacaggaaaagactgaagatgga
aaactggcaccgtgcagtatccagcaggagctgtgtgtgtcctag
DBGET
integrated database retrieval system
