Arvicanthis niloticus (African grass rat): 117705281
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Entry
117705281 CDS
T08817
Symbol
Obsl1
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117705281 (Obsl1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
117705281 (Obsl1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
Izumo-Ig
BiPBP_C
Ig_4
C2-set_2
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
117705281
NCBI-ProteinID:
XP_034353628
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Position
3:108368138..108388115
Genome browser
AA seq
1896 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPTVLWEKGGQQLVASERLSF
PEDGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEPEPQSSECPLPP
PGTGEGAPVFLTGPRSQWVLRGEEVVLTCQVGGLPEPKLYWEKDGMALDEVWDSSHFKLE
PGRGASDEGASLTLRILAVRLPDSGVYVCHARNAHGHAQAGALLQVHQPQENPPQDPDET
PRPVMEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHLEGRPLLPDRRRLMYRDRDG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIVVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLIIHKLKADDDGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVLEGENAVLLVETQEAGVQGCWSRDGEELPDTCQSSCGHMH
ALVLPGVTREDAGEVTFSLGNSHTTTLLRVKCVKHSPPGPPILVEMFKGQKNTVLLTWKP
PEPPPETSFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPTEGDYRFRICTVSEHGR
SPHVVFNGSAHLVPTARLVSGLEDVQVYDGEDAVFSLDLSTIIQGSWFLNGEQLTSNEPE
GQVEPGALQYRIEQKGLQHKLILKAVKHQDSGALVGFSCPGVQDSAALSIQESPVHILSP
QDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESESLVVKMDGRKHRLILPEAQV
QDSGEFECRTEGVSAFFVVTVQDPPVHIVDPQEHVFVHAITSECVRLTCEVDREDATVHW
YKDGQEVEESDVIILENEGPQHRLVLPAARPSDGGEFQCVVGDKRAYFTVTITDVSSWIV
YPSGKVYVAAVHLERVVLTCELCRPWAEVRWTKDGEEVVESPELLLEKEETIRRLVLPSV
QLEDSGEYLCEIHDESASFTVTVSEPPVRIIYPQDEVTLTAVSLECVVLTCELSREDAPV
CWYKDGLEVEESEALVLQSDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTAPPER
IVHPAARSLDLQFVAPGHVELRCEVAPAGSQVRWYKDGLEVEVSDALQLGAEGPARTLTL
PHAQPEDAGEYVCETRDEAVTFNVSLAELPVQFLAPEAAPNPLCVVPGEPVVLSCELSRA
SAQVFWSHNGSPVQQGEGLELRTEGPRRILCIQAADLAHAGVYTCQSGASPGAPSLSFNV
QVAEPPVRVVAPEAAQTRVRSTPGGDLELVVHLSRPGAPVRWYKDGERLASQGRVQLEQA
RERQVLRVRGAQRGDAGEYLCDAPQDSRIFIVSVEELPPVKLVSELTPLTVHEGDDATFQ
CEVSPPDAEVTWLRNGAVVTPGPQLEMVLNGSVRTLIIRGCQLKDAGTVTARAGATDTSA
RLHVRETELLFLRRLQDVRAEEGQDVYLEVETGRVGAAGAVRWIRGGEPLPLDSRLTTAQ
DGHVHRLSIHGVLLTDQGTYGCESHHDRTLARLSVRPRQLRELRPLEDVTVHEGGSATFQ
LELSQEGVTGEWAHGGVRLHPGPKCHIHSEGRTHRLVLSGLGLADAGCVSFTADTLRCAA
RLTVKEVPVTIVQGPQDLEVTEGDTATFECELSQTLADVIWEKDGQVLSLSPRLRLQALG
TRRLLLLRRCCSTDAGTYNCVVGTARSGPARLAVREREVSVFRELQPVSAREGDSATFEC
TVSETETTGRWELGGRALRPGGRVRVRQEGKKHILVLSELRTEDTGEVCFQAGPAQSLAR
LEVEALPLQMCRRPPREKTVLVNRRAVLEVTVSRPGGHVCWMREGVELCPGNKYEMRSHG
TTHSLVIHDVRPEDQGTYNCQAGQDSADTQLLVEGD
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccggctcaggggatcaggggagccccccgtgcttcctacgcttcccgcggccc
gtgcgggtggtaagtggcgcggaggccgagctcaaatgcgtggtcctgggagagccgccg
cccaccgtcttgtgggagaaaggcgggcagcagttagtggcctcggagcgcctgagcttt
ccggaggacggcgccgagcacggcctgctgctgagcggcgcgctgcccaccgacgccggg
gtctacgtgtgccgcgcccgtaacgcggctggagaggcctacgcggcggccgccgtcacc
gtgctggaacccccggccccagagcccgagccccagtcctccgagtgtccgctgccgccg
ccgggcaccggagagggcgccccggtgttcctgacggggccccgatcccagtgggtgctg
cgaggggaggaggtggtgctgacgtgccaggtgggaggcctccccgagcccaagctgtac
tgggagaaggatgggatggccctggacgaagtgtgggacagcagccacttcaagctggag
ccgggccgcggcgcgagtgacgagggcgcaagcctgacgttgcgcatcctggcggtgcgg
ctgcccgattccggggtgtacgtgtgtcacgcccgcaacgcgcacggccacgcgcaggcg
ggcgcgctgctccaggtgcaccagccccaggagaacccgccccaggaccccgatgagacc
cccagaccggtgatggagccgctcaaatgcgcgcccaagaccttctgggtgaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcctgagcccgagatcgaatggcac
ttggagggccgccctctgcttcccgatcgccgccgcctcatgtaccgcgaccgcgacggt
ggctttgtacttaaggtgctctactgccaggccaaggaccgtgggctctacgtgtgcgcg
gcgcgcaactcggcgggccagacgctaagtgcggtccagctgcacgtgaaagagccccgc
ctacggttcacacggcccctgcaggatgtggagggccgagaacacgggatcgtagtgctg
gagtgtaaagtacccaactctcgaattcccaccgcctggtttcgagaggaccaacgactg
ttaccctgccggaaatatgagcagattgaggaaggcactgtgagacgcctcatcatccac
aagctgaaggcagatgatgatggtgtctacctgtgtgagatgcggggccgtgtgcgcacc
gtggccaatgtgacggtcaaaggacccatcctgaagcgcttacccaggaagcttgatgtc
ctggaaggagagaacgcggtactgctggtggaaacgcaggaagctggggtgcaggggtgc
tggagccgcgatggggaggagctaccagacacctgccagagcagttgtggtcatatgcat
gccctggtccttccaggggtgacccgagaagatgctggcgaggtcaccttcagcctgggc
aactcccataccaccactctgctcagagtcaaatgtgtcaagcacagtcctcctgggccc
cccatattggttgagatgttcaaaggccaaaagaacacggtcctgctgacctggaagccc
ccagagccacctccagagacttccttcatctaccgcctagagcggcaggaagtagggtct
gaggattggatccaatgcttcagcattgagaaagcgggagccgtagaggtgcctggggac
tgtgtacccactgagggcgactaccgtttccgcatctgcacagtcagtgaacatggccgc
agtccccatgttgtgttcaacggttctgctcaccttgtacccacagctcgcctggtgtca
ggcctggaagatgtacaggtgtatgatggggaagatgccgtcttctcccttgatctgtcc
accatcatccagggctcttggttcctgaatggagagcagctcactagtaatgagccggag
ggccaggtggaacctggagccctgcagtaccgaatagagcagaagggccttcagcacaaa
ctcatcctgaaagctgtcaagcaccaggacagtggggccctggtaggcttcagctgccct
ggtgtgcaagactctgctgccctcagtatccaagaaagcccagtgcacatcctgagtccc
caggacaaggtgtcactgaccttcacgacctctgaacgggtcgtgctgacctgtgagctc
tcaagagtggattttccagcaacctggtacaaggatgggcagaaggtggaggagagcgag
tcactcgtagtaaagatggatgggcgcaaacaccgactgatcctgcctgaggctcaagtc
caagacagcggtgaatttgaatgcagaacggaaggggtctcagccttcttcgttgtcact
gttcaagatcccccagtgcacatcgtggacccccaagaacatgtgtttgtccatgccatc
acctccgagtgtgtcaggctgacctgtgaggtggaccgagaggacgcaactgtgcactgg
tacaaggatgggcaggaggtggaggagagtgatgtcatcatattggagaatgaagggccc
cagcaccgcctggtgctacctgcagcccggccctctgacgggggcgagtttcagtgcgtt
gtaggagacaaacgtgcctactttacagttaccatcacagatgtctcttcatggatcgtg
taccccagtggcaaagtgtatgtggcagctgtacacctagagcgtgtggtgctgacctgt
gagctgtgccgaccctgggctgaggtgcgctggaccaaagatggggaggaggtagtggag
agcccagaattgctcctggagaaggaagagaccatccgccgcctggtgctgccctctgtc
cagcttgaggattctggcgagtacctgtgtgaaatccatgatgagtcagcttccttcact
gtcaccgtctcagagccccctgtgcggatcatatacccccaggatgaggtgaccttaact
gctgtgagtttggaatgtgtggtgctcacatgtgagctatctcgagaggatgctcctgta
tgctggtacaaggatgggttagaagtggaggagagtgaggccctggtgctccaaagtgat
gggcctcgtcgtcgtctggtgttgcctgctgcccagccagaggacgggggcgagtttgtg
tgtgatgctggggatgattcagccttcttcactgtcactgtcacagctccaccagagagg
attgtgcacccagcagcccgatccctggatttgcagtttgtggccccaggacacgtggag
ctacgctgcgaagttgccccggctgggtctcaggtgcgctggtacaaggatggtctagag
gtagaggtgtcagatgcactgcagctgggtgccgaggggcctgcccgcactctcaccctg
ccccacgcccagcctgaggatgccggggagtatgtatgtgagacccgagatgaggctgtc
accttcaacgtcagcctggctgagcttccagtgcagtttctggctccagaggcagcccca
aacccgctctgcgtggttcctggggagccagtggtgctgagctgtgagctgtcccgagca
agcgcacaagtgttctggagccacaatgggagccctgtgcagcagggcgaaggactcgag
ctgcggactgagggtcctcgccgaatcctctgcatccaggctgcagaccttgctcacgca
ggtgtctacacctgccaatctggtgcatccccaggggccccaagcctcagcttcaatgtc
caggtggctgagcccccggtgcgggtagtggcccccgaggcagcccagacgagggttcga
agcaccccaggcggggacctagagctggtggtacacctctccaggccaggggcccctgtg
cgctggtacaaggacggggaacgcctggcaagccaggggcgggtgcagctggaacaagcc
agggagaggcaggtgctgcgggtgcggggggcacagagaggggatgctggagaatacctg
tgcgatgcaccccaggacagtcgcatcttcatcgtcagtgtggaagagctcccaccagtg
aagttggtctctgaactgacgcccctgacagtccacgagggtgacgatgccacattccag
tgtgaggtttcaccaccagatgccgaagtcacctggctacgcaatggagctgttgtcaca
ccagggccacagctggagatggtcctgaatggttcagtccgcaccctgatcatccgaggc
tgccaactcaaagatgcagggactgtgactgcgcgagctggagccactgacacgagtgcc
aggctccatgttcgagagacagagctgctgttcttgcggcggctgcaggatgtgcgggcc
gaggaaggtcaggatgtgtaccttgaggtagagacaggccgagtaggtgcggctggagct
gttcgctggatacgaggtggggaacctcttcctctggactctcgcctgaccacggcccag
gatggccatgtccaccgcctctctatccatggcgtcctccttaccgaccagggtacctac
ggctgcgagagccaccatgatcgcaccctggccaggctcagtgtgaggccccggcagttg
agggaacttcggcctctggaggatgtgactgtccatgaagggggcagcgccaccttccag
ctggagctgtcccaggagggagtgactggagagtgggcccatggtggagtccggctgcac
ccaggacccaagtgccacattcattcagaaggccgtactcaccgcttggtgctaagcggc
ctgggtctggctgatgcaggctgtgtctccttcactgcggatacccttcggtgtgctgct
cggctcacagtgaaagaggtcccagtgactattgtgcaggggccacaggacctagaagtg
actgaaggtgacacagccacgttcgagtgcgagctctcccagactttggctgacgtaata
tgggagaaggatgggcaggtgctctctctcagcccgcgcctccggctccaggctctcggc
acgcgccgccttctgcttctgcggcgttgctgctccacagacgccgggacctacaactgc
gttgtggggacagctcgctccgggcctgcgcgcttggccgtgcgcgaacgagaggtgtct
gtgttccgtgaactccagccggttagcgcccgcgaaggagacagcgccacgttcgagtgc
accgtgtcggagaccgagaccaccgggcgctgggagctcggaggccgcgcgctgagaccg
ggaggtcgcgtccgcgtccgacaggaagggaagaaacacattctggtgctgagcgagctg
cgaaccgaggacaccggagaagtctgcttccaggcgggacccgcccagtccttggctcgg
ctagaggtggaggcgttgcctctccagatgtgccgccgcccacctcgcgagaagacggtt
ctggtcaaccgcagagcggtgttggaggtgactgtgtcccgccctgggggccacgtgtgt
tggatgcgggagggggttgaattgtgcccgggaaacaagtatgagatgcgtagccacggc
accacccacagcctagtcatccatgacgtccgacctgaggaccagggcacctacaattgc
caagcaggccaggacagtgctgacacacagctgctggtagagggtgactag
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