Arvicanthis niloticus (African grass rat): 117705293
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Entry
117705293 CDS
T08817
Symbol
Rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117705293 (Rnf25)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117705293 (Rnf25)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117705293 (Rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
zf-RING_2
zf-RING_11
VPS18_RING_C
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Med15_C
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117705293
NCBI-ProteinID:
XP_034353649
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All DBs
Position
3:109167993..109175523
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AA seq
476 aa
AA seq
DB search
MYSGRFVLKSVFISLGNFSRESCNGYPVSPLFSRVLPSEVEVLESIYLDELQVMKGNGRS
PWEIFITLHPATAEVQDSQFVCCTLVLRIPVQYPHEVPQISIRNPRGLSDEQIHKISQAL
GHVAKEGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHC
LARYIQHMEQELNTQEQEQERQHVVTKEKAVGVQCPVCREPLVYDLASLKAAPEPQQPME
PYQPSAESLRQQEELKRLYQRQQEKGGIIDLEAERNRYFISLQQPPAALEPESVVDVSRG
PQPPNALSAEQSTSLAVQSTLPTPLPMATQYVYEKTSGPGPNQQRPGETQKSVLDPPRPG
RGSWRQYDRRHPKGGECCAPKGTSEIHELPPPEKPLKETVDLKAEPRNKGLTGHPQEKGP
GSWQGPSARRTRDCARWERSKNRTPGSSYPHLPRGQGTYRSGTRREPLGLESEEGS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaggcagatttgttttaaagtcagtcttcatcagccttggcaacttcagcagg
gagagctgtaatggttacccagtctcccccttattctccagggtccttccctctgaagtt
gaagtattagagtctatctatctggatgagctacaggtgatgaaagggaatggcagatca
ccatgggagatctttatcactctgcaccctgccaccgcagaggtccaagattcgcagttt
gtctgctgtactctggttcttcggatcccagtacagtatccccacgaggtgccacagatc
tccatccgtaaccctcgaggactttcagatgagcagatccacaagatctcacaggcactg
ggccatgtggccaaggaaggactaggcactgccatgctctatgaactcattgagaaaggg
aaggagattctcacggataacaacatcccccatggtcagtgtgtcatctgcctctatggg
ttccaggagaaggaggcctttaccaaaacaccgtgttaccactactttcactgccattgc
cttgccaggtacatccaacacatggagcaagagctgaatacacaggaacaggagcaggag
cgacagcatgttgttaccaaggagaaggcagtcggtgtgcagtgtcctgtgtgcagggag
cctcttgtgtatgatcttgcctcgctgaaagcagcccctgaaccccaacaacccatggag
ccgtaccaacccagtgcagagagcttgcgccaacaggaagagctcaaacggctgtatcag
aggcagcaggaaaagggtggcattatcgaccttgaggctgaacggaaccgatatttcatt
agccttcagcagcctcctgctgctcttgaacctgagtcagttgtagatgtctccagagga
ccccaacctcccaatgccctttctgcagaacaatctacttccttagctgtccaatcaact
ctgccaactcctctacccatggcgacccagtatgtgtatgagaagacttcggggcctggg
ccaaatcaacagaggccgggtgagactcagaaatccgtgctagatcctccacgacccggt
cgtggctcctggcgacagtatgatcggaggcacccaaaaggaggggagtgctgtgcccca
aaaggtaccagtgaaatccacgaactgccacctcctgagaagcctctcaaggagactgtg
gacttaaaggcagaaccccgtaacaaagggctcacaggtcatcctcaggagaaggggcct
ggtagctggcagggcccctcagctcgcaggactcgggactgtgctcgctgggaacgctcc
aaaaatcgtacaccgggttcttcctatccccatctacctcggggccagggaacataccgg
tctggtactcgcagggagcccctgggcttggaatctgaggaaggttcctag
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