Arvicanthis niloticus (African grass rat): 117705295
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Entry
117705295 CDS
T08817
Symbol
Fn1
Name
(RefSeq) fibronectin isoform X7
KO
K05717
fibronectin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04518
Integrin signaling
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu04933
AGE-RAGE signaling pathway in diabetic complications
anu05100
Bacterial invasion of epithelial cells
anu05135
Yersinia infection
anu05146
Amoebiasis
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117705295 (Fn1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117705295 (Fn1)
04518 Integrin signaling
117705295 (Fn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117705295 (Fn1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117705295 (Fn1)
04810 Regulation of actin cytoskeleton
117705295 (Fn1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117705295 (Fn1)
05205 Proteoglycans in cancer
117705295 (Fn1)
09162 Cancer: specific types
05222 Small cell lung cancer
117705295 (Fn1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117705295 (Fn1)
09171 Infectious disease: bacterial
05135 Yersinia infection
117705295 (Fn1)
05100 Bacterial invasion of epithelial cells
117705295 (Fn1)
09174 Infectious disease: parasitic
05146 Amoebiasis
117705295 (Fn1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117705295 (Fn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117705295 (Fn1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117705295 (Fn1)
00536 Glycosaminoglycan binding proteins [BR:
anu00536
]
117705295 (Fn1)
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117705295 (Fn1)
Membrane trafficking [BR:
anu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
117705295 (Fn1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
117705295 (Fn1)
Glycosaminoglycan binding proteins [BR:
anu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117705295 (Fn1)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
117705295 (Fn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_VIN3
Fn3_Dep-1_3rd
NDNF
DUF8447
FN3_Tor_3rd
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
117705295
NCBI-ProteinID:
XP_034353655
LinkDB
All DBs
Position
3:111920178..111989529
Genome browser
AA seq
2477 aa
AA seq
DB search
MLRGPGPGRLLLLAVLCLGTSVRCTEAGKSKRQAQQIVQPQSPVAVSQSKPGCFDNGKHY
QINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYKVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDKWRRPHETGGYMLECLCLGNGKGEWTC
KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGNGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHALQSASAGSGSFTDVRTAIYQPPTHP
QPAPYGHCVTDSGVVYSVGMQWLKSQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHAVLVQTRGGNSNGALC
HFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDLGHMMRCTCVGNGRGEWACIPYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPIDQCQDSETRTFYQIGDSWEKFVHGVRYQCYCYGRGIGEWHCQ
PLQTYPGTTGPVQVIITETPSQPNSHPIQWNAPEPSHITKYILRWRPKTSSGRWKEATIP
GHLNSYTIKGLTPGVIYEGQLISIQQYGHREVTRFDFTTSASTPVTSNTVTGETTPFSPV
VATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLL
PGRKYIVNVYQISEEGKQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPITGY
RIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGI
PRSDNVPPPKDLQFVEVTDVKVTIMWTPPDSAVSGYRVDVLPVSLPGEHGQRLPVNRNTF
AEITGLSPGVTYLFKVFAVHQGKESNPLTAQQTTKLDAPTNLQFVNETDRTVLVTWTPPR
ARIAGYRLTTGLTRGGQPKQYNVGPLASKYPLRNLQPGSEYTVTLVAVKGNQQSPKATGV
FTTLQPLRSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVS
GLTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTP
DITGYRITTTPTNGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESAPISD
TVIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVG
YYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPP
PSIELTNLLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVGVSSVYEQHESIPL
RGRQKTGLDSPTGFDSSDITANSFTVHWVAPRAPITGYIIRHHAEHSAGRPRQDRVPPSR
NSITLTNLNPGTEYVVSIIAVNGREESPPLIGQQSTVSDIPRDLEVIASTPTSLLISWEP
PAVSVRYYRITYGETGGNSPVQEFTVPGSKSTATINNIKPGADYTITLYAVTGRGDSPAS
SKPVSINYQTEIDKPSQMQVTDVQDNSISVRWLPSTSPVTGYRVTTTPKNGLGPSKTKTA
SPDQTEMTIEGLQPTVEYVVSVYAQNQNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKI
AWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEDDTAELQGLRPGSEYTVSVVALHDDME
SQPLIGVQSTAIPAPTNLRFTQVTPTSLTAQWIAPSVQLTGYRVRVTPKEKTGPMKEINL
SPDSSSVIVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTI
TISWRTKTETITGFQVDAIPANGQTPVQRTISPDVRSYTITGLQPGTDYKIHLYTLNDNA
RSSPVIIDASTAIDAPSNLRFLTTTPNSLLVSWQAPRARITGYIIKYEKPGSPPREVVPR
PRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEI
LDVPSTVQKTPFITNPGYDTENGIQLPGTTHQQPSVGQQMLFEEHGFRRTTPPTAATPVR
LRPRPYLPNVDEEVQIGHVPRGDVDYHLYPHVPGLNPNASTGQEALSQTTISWTPFQESS
EYIISCQPVGTDEEPLQFQVPGTSTSATLTGLTRGVTYNIVVEALQNQRRHKVREEVVTV
GNTVNEGLNQPTDDSCFDPYTVSHYAVGEEWERLSDSGFKLTCQCLGFGSGHFRCDSSKW
CHDNGVNYKIGEKWDRQGENGQRMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQK
EYLGAICSCTCFGGQRGWRCDNCRRPGAAEPSPDGSTGHTYNQYTQRYHQRTNTNVNCPI
ECFMPLDVQADRDDSRE
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggtccgggacccgggcggctgctgctgctggcagtgctgtgcctggggacg
tcggtgcgctgcaccgaagccgggaagagcaagagacaggctcagcaaatcgtgcagcct
cagtccccggtggctgtcagtcagagcaagcctggctgttttgacaatgggaagcactac
cagataaatcagcagtgggaacggacctacctaggcaacgccctggtttgtacctgctac
ggaggaagccgaggttttaactgcgagagtaaacctgaacctgaagagacttgttttgac
aaatacactgggaacacttacaaagtgggtgacacttacgagcgccctaaagattccatg
atctgggactgtacctgcatcggggctggtcgaggcaggatcagctgtaccattgcaaat
cgctgccatgaagggggtcagtcctacaagattggtgacaagtggaggaggccacatgag
actggtggctacatgttagaatgtttgtgtctgggaaatggaaaaggggaatggacctgc
aaacctatagctgagaaatgttttgatcatgctgctggaacttcctatgtcgtgggggag
acctgggaaaaaccctaccaaggatggatgatggtggactgtacttgtctaggagaaggc
aatggacgcatcacctgtacctccagaaacagatgcaatgatcaggacacccggacgtcc
tatagaattggagacacgtggagcaagaaggacaaccgaggaaacctgctacagtgtgtc
tgcacaggcaacggcagaggggagtggaagtgtgagagacacgctctacagagtgcttca
gcaggatctggctccttcactgatgtccggacagctatttaccaacccccgactcatccc
cagcccgctccatatggccactgtgtcacagacagtggtgtggtctactctgtgggaatg
cagtggctgaagtctcaaggaaacaagcaaatgctgtgcacttgcctgggcaatggggtc
agctgccaggagacagcggtgacccagacttatggtggcaattcaaacggggagccctgt
gtcctcccgttcacctacaacggtaggaccttctattcctgcaccactgaagggcggcaa
gacggacatctgtggtgtagcacgacttcaaattacgaacaagaccagaagtattctttc
tgcacagaccacgcggttttggttcagactcgaggtggaaattccaatggtgctctgtgc
cacttccccttcctgtacaacaaccgtaattacaccgactgtacttctgagggtcggagg
gacaacatgaaatggtgcggcaccacccagaactacgatgccgatcagaagtttggattc
tgccctatggctgcccacgaggagatctgcacaaccaatgaaggagtcatgtatcgcatt
ggggaccagtgggataagcagcatgacctgggccacatgatgaggtgcacgtgtgttggg
aacggtcgtggagaatgggcctgcatcccctactcccagcttcgagatcagtgcatcgtt
gatgacatcacttacaacgtgaacgacacattccacaagcgccacgaggagggacatatg
ctgaactgtacctgctttggtcagggccggggcagatggaagtgtgaccccatcgaccag
tgccaagattcagagacccggacattttaccagattggtgactcctgggagaagtttgtg
catggtgtccgataccagtgttactgctacggccgtggcattggagagtggcattgtcaa
cctctgcagacctacccaggcacaactggacctgttcaagtaattatcacagagaccccc
agccagcccaattcccaccccatccagtggaatgccccggagccttcacatatcaccaag
tacatcctcagatggagacctaaaacctcttcgggtcgctggaaggaggctaccattcca
ggccaccttaactcctataccatcaaaggcctgaccccaggtgtcatctatgagggacag
ctgatcagcatccagcagtacggacacagagaagtgacacgctttgacttcaccaccagc
gccagcacacctgtgaccagcaacacagtgaccggagagactacgcccttttctcccgtt
gtggccacttctgaatctgtaactgaaatcacagccagcagctttgtggtctcgtgggta
tcagcttctgacaccgtgtcaggattccgggtggagtatgagctgagcgaggagggagat
gagccacagtaccttgatcttccaagcacggccacttctgtgaacatccctgacctgctc
ccgggcagaaagtacattgtcaatgtctatcagatatctgaagagggaaagcagagcttg
atcctgtccacatcacagactacagcaccggatgctcctccagaccctactgtggaccag
gttgatgatacttccattgttgttcgatggagtagaccccaggcacctatcacagggtac
agaattgtctattcaccttcagtagaaggcagtagcacagaactcaaccttcctgaaacg
gccaactctgtcaccctcagtgacctgcagcctggtgttcagtacaacatcacaatctat
gctgtggaggaaaaccaggagagcacacccgttttcatccaacaggagacaactggcatc
ccacgatctgataatgttccccctccgaaggacctacagtttgtggaagtgacagacgtg
aaagtcaccatcatgtggacccctcctgatagtgcagtgtctggataccgagtggatgtc
ctgcctgtcagcctgcctggggaacatgggcagaggctgcctgtcaataggaacaccttt
gctgaaatcaccgggctgtcccctggggtcacatacctcttcaaagtctttgctgtgcat
cagggcaaggaaagcaatcctctgacagcacaacagactaccaaacttgatgctcccact
aacctccagtttgtcaacgaaactgacagaacagttctggtaacgtggactccacctcga
gctcgcatagcgggctaccgactgaccaccggcctgacccgaggcggccaacccaagcag
tacaatgtgggacccttggcttccaagtatcccctgagaaatctgcagcctgggtctgag
tacactgtgaccttggtggctgtgaaaggcaaccagcagagtcccaaagccaccggagtc
tttactaccctgcagcctctgcgttccattccaccatacaacacggaagtgacagagacc
acaatcgtcatcacctggacccccgctccaaggattggcttcaagctgggtgtacgacca
agccagggaggtgaagcaccccgagaagtgacttcagactcaggaagcatcgttgtgtct
ggcttgactccaggcgtggaatacacttacaccatccaagtcctgagagatggccaggag
agagatgcaccgatcgtgaacagagtagtgacaccgctgtctccaccaaccaacttgcac
ctggaggcaaaccctgacactggagtgcttactgtctcctgggagaggagcaccacccca
gatatcactggctacagaataaccactacccccacaaatgggcagcaggggacctctctg
gaagaagtagtccatgccgatcagagttcctgcacttttgaaaacctgaatcccggcctg
gagtacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgcccctatctctgat
accgtcatcccagaggtgccccagctcactgacttaagctttgttgatataactgattca
agcatcggcctgaggtggaccccgctaaactcttccaccattatcgggtaccgaatcaca
gtagttgcggcaggagaagggatccctatttttgaagattttgtggactcctcagtagga
tactacacagttacagggctggaacccggcattgactatgacatcagcgttatcactctc
attaatggcggagagagtgcccctaccacactgacgcagcaaacggctgtccctcctccc
acggatctgcgattcaccaatattggtccagacactatgcgggtcacttgggccccacct
ccatccatcgagctgaccaacctcttggtgcgctactcacctgtgaagaatgaggaggac
gttgcagagttgtccatttcaccttcagacaatgccgtggtcctaacaaatcttctgcct
gggaccgaatacctagtcggtgtctccagtgtctatgaacaacacgagagcatccctctg
cgaggaagacagaaaacaggtctcgattctccaactggttttgattcttctgatatcact
gccaactcattcaccgtccactgggtggctcctcgggcccccatcaccggctacataatc
cgccatcatgccgagcattctgccggaagacccaggcaagatcgagtgcctccctcaagg
aattctatcaccctcaccaaccttaatccgggcacagagtacgttgtcagcatcattgct
gttaatggcagagaggagagccccccactgattggccagcaatcgacagtttctgatatt
ccgagagacctggaggtcattgcttccactcccaccagcctgctcatcagctgggagccc
cccgccgtctctgtacgctattacagaatcacctacggagagacaggaggaaatagccct
gtccaggagttcactgtgcccggaagtaagtccacagccaccatcaacaacattaaacca
ggagcagactacaccatcaccctgtatgctgtcactggccgtggggacagtccagcaagc
agcaagccagtttccatcaattatcaaacagaaattgacaagccatcccagatgcaggtg
acggatgtccaagacaacagcatcagtgtcaggtggttgccttcaacttctcctgtgaca
ggttacagagtgaccaccacgcccaaaaatggcctaggaccatcaaaaactaaaactgcc
agtccagatcagacagaaatgaccattgaaggtttgcaacccaccgtggagtatgtggtt
agtgtctatgctcagaaccagaacggagagagccagcctctggttcaaactgcagtaacc
aacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatcaaaatt
gcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgagccctgag
gatggaatccatgagcttttccctgcacctgatggtgaagacgacactgcagagctgcaa
ggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatggag
agccagcccctgattggagtccagtccacagccattcctgcgccaaccaatctgaggttc
actcaggtgacacccaccagtttgactgcccagtggatagcgcccagtgttcagctcact
ggctaccgagtgcgggtgaccccgaaggagaagactggaccaatgaaagaaatcaacctt
tctccagacagctcatcagtgattgtgtcgggactcatggtggccaccaagtatgaagtc
agtgtctatgctctcaaggacacattgacaagcagaccagctcagggagtcgtcacaact
ctggagaatgtcagccctccaagaagggcccgtgtgacagacgctacagagaccaccatc
actattagctggagaacgaagacagagacaatcactggcttccaagtcgatgccatccca
gccaatggccagaccccagttcagaggaccatcagcccggatgtcagaagctatactatt
acaggtttacagccaggtactgactacaagatccacctgtacactctgaacgacaatgcc
cgaagctctcctgtgatcatcgatgcctccactgccattgatgcaccctccaaccttcga
ttcctgaccaccacacccaactccttgctggtatcatggcaggcaccccgtgccaggatt
actggctacattatcaagtatgagaagcctggatcccctcccagagaagtggtccctcgg
ccccgccctggtgtcacggaggccaccatcactggtctagagccaggaactgagtatacc
atctatgtcattgccctgaagaacaatcagaagagtgaacccttgattgggaggaaaaag
acagatgagcttccccaactggttaccctaccacaccccaatcttcatggaccagagatc
ttggatgttccctccacagttcaaaagacccccttcatcaccaaccctgggtatgacacc
gaaaatggtattcagcttcctggcacaacccaccaacaacccagtgttgggcaacaaatg
ctctttgaggaacatggctttaggcggactacgccacccactgcggccacccccgtcagg
cttaggccaagaccatacctgccgaatgtagatgaggaggtccaaatcggtcatgttccc
aggggagacgtagactaccacctctatcctcatgttccggggctcaatccaaatgcctct
acaggacaagaagctctctctcagacaaccatctcttggacgccattccaggagagttct
gagtacatcatttcatgccaacctgttggcaccgacgaggagcccttacagttccaagtt
cctggaacttctaccagtgcaactctgactggcctgaccagaggggtcacctacaacatc
gtagtggaggcactgcaaaaccagaggaggcacaaggttcgggaagaggttgttactgtg
ggcaacactgtcaacgaaggcctgaaccagcctacagatgattcatgcttcgacccttac
acggtttcccattatgcggttggagaggaatgggagcggttgtctgactctggctttaag
ctcacatgccagtgcttgggctttggcagtggtcatttcagatgtgattcatctaaatgg
tgccatgacaacggtgtgaactacaagattggagagaagtgggatcgtcagggagagaat
ggccagcggatgagctgcacatgcctcgggaacggaaagggagaattcaagtgtgatccc
catgaagcaacgtgttatgacgacgggaagacctaccacgtaggagaacagtggcagaag
gaatatctcggagccatttgttcctgcacgtgtttcgggggccagcggggttggcgctgt
gacaactgccgcagacccggggctgctgaacccagtcccgatggctctactggccacacc
tacaaccagtatacacagagataccatcagagaacgaacactaatgtaaattgcccaatt
gaatgcttcatgccgttagatgtgcaggccgacagagacgattccagagagtaa
DBGET
integrated database retrieval system
