KEGG   Arvicanthis niloticus (African grass rat): 117705318
Entry
117705318         CDS       T08817                                 
Symbol
Dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11 isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:anu04121]
    117705318 (Dcaf11)
Ubiquitin system [BR:anu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117705318 (Dcaf11)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N PmrD
Other DBs
NCBI-GeneID: 117705318
NCBI-ProteinID: XP_034353733
LinkDB
Position
3:complement(63706858..63717164)
AA seq 549 aa
MGSRNSSSAGSGSLEPSEGLSRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQG
GGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDAAPDTRELEYNEIKTQVELATGRL
GLRRTAQEHSFPRMLYQRERGLCHRGSFSLGEQSRVMSHFLPNDLSFTDTYSQKAFCGIY
SKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSD
YIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRT
LQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITF
IDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKL
KLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLT
NHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYRHAEYFQDDMPESDMNRVCSSGSTPVPC
PSVAFSSPQ
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgggatcacggaacagcagcagcgcaggatccgggtccttagaaccctccgaaggcttg
tcccgtagaggggctggcctgcgtcgtagtgaggaagaagaagaagaggatgaagatgtg
gatctggcccaggtactggcctatctcctccgcagaggccaagtgaggctggtgcaggga
ggaggtgcagcaaatttacaactcatccaggccctctcggactcagaggaagagcatgac
agtgcctgggacggtcgccttggagatcgatacaacccacctgtggatgcagcccctgac
accagggagctggaatacaatgagatcaagacacaagtggaattggccacagggcgactg
ggacttaggaggactgcccaggagcatagctttcctcgaatgttataccagagagaacgg
ggcctttgccaccggggaagcttctcccttggagaacaatctcgagtgatgtctcacttc
ttgcccaatgatctaagtttcactgatacctactctcagaaggctttctgcggcatctac
agcaaagatggtcaaatcttcatgtctgcttgccaagatcagacaatccgactgtacgac
tgtcggtatggccgcttccacaagttcaaaagcatcaaggctcgggatgtaggctggagt
gtcctggatgtagccttcactcctgatggaaaccacttcctgtactccagctggtctgat
tacattcatatctgcaacatctatggggaaggagacacacatactgccctggatttaagg
ccagatgaacgtcgctttgctgtcttctccatcgctgtctcctcagatggacgagaagta
ctaggaggagccaatgatggctgcctatatgtctttgaccgagaacaaaaccggcgtact
cttcagattgagtctcacgaggatgatgtgaatgcagtagcctttgctgacataagctcc
caaatcctgttctctgggggagacgatgccatctgcaaagtgtgggatcgacgaaccatg
agggaggatgatcccaagcctgtgggtgcactggctggacaccaggatggcatcaccttt
attgacagcaagggtgatgcccgctatctcatctccaactccaaagatcagaccattaag
ctttgggatatcagacgcttttccagcagagaaggcatggaagcgtcacgactggctgcc
acacagcaaaactgggactatcgctggcagcaggtgcccaagaaagcctggaagaagttg
aagctcccaggtgacagctccttgatgacctacagaggccatggagtgcttcacactctg
atccgatgccgattctccccagcccacagcaccggccagcagttcatctacagtggctgc
tctactggcaaagtggttgtatatgacctcttaagtggccacattgtgaagaagctgacc
aatcacaaggcctgtgtgcgtgatgtcagttggcatccctttgaagagaagattgtcagc
agttcgtgggatgggaacctacgtctatggcagtaccgccacgctgagtacttccaggat
gacatgccagaatctgacatgaacagagtctgttccagtggctctactccggtgccctgc
ccatctgtggccttttcctcacctcagtag

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