Arvicanthis niloticus (African grass rat): 117705320
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Entry
117705320 CDS
T08817
Symbol
Rp1l1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117705320 (Rp1l1)
04812 Cytoskeleton proteins [BR:
anu04812
]
117705320 (Rp1l1)
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117705320 (Rp1l1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117705320 (Rp1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
117705320
NCBI-ProteinID:
XP_034353741
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All DBs
Position
3:complement(55289980..55330165)
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AA seq
1875 aa
AA seq
DB search
MNSTPGDTRDAPAPSQPAPSHRQCLLPSVAHTPSVTEVTPAKKITFLKRGDPQFAGVRLA
VHQRTFKTFSALMDELSQRMPLSFGVRSVTTPRGLHGLSALEQLQDGGCYLCSDRKPPKT
PRDTGQLQRKSPSAGQSQVFEGGGEAPVTSYSWKGPRAPRRLTLVKNGDPRCQQTVVLSH
KNTRNLAAFLSKASELLRFPVKQVYTICGKKVDSLQTLLDGPSLLVCAGNEAFKRLEMEN
ERGNRTRMLSGVTARNERGCWGPNTKQSVIHSRGRSGGKLRQFSLASERSGLSDHPASGH
QAWAGPALDRCPQDTPAPPGSLVAADGVEKKVCMNEDGSLSVEMKVRFQLLDEDTLRWSQ
RVGVGHASVFAGASGEGQDLREADRFCCRQEGYPWGILEPGAQGLGPYDGGCQGAFDVGQ
QSRPSYDIWRNPLTAPEGTRPTPRRRWGLAKLSRCKNHWRQGASDRKGHGKDNSSPVSTR
RHPRSVQPGSCCPWTPEGETGSDTLQPVSSASSQSETELESGESPCLQDTGPRGLRPETQ
SIKRALSDTSVNVESCGESSEGGGQLHRGSSQARVMASQGQVTKGDNPYISTQSHLPLNH
PGLQTEKYSEGTRWREVRGEPVLRLPLVPGHSGSQNTQRDALPVPARAPAQRRQRKQKRP
AGVVCLPSVSAPYQVAQKGHAGQCYHCRDTQSSLDTALQMPVPPEREQACPGSPAQQFPS
NSSSAENQAEDLRSPCSSSLDFRETQATSKAATMAMSDSDCVSSFCHPSTHSAEPVGDTK
CQAHSSTPSPVHREEVGCLRDTAGTTPEPFSSSVLPDRWPEAEDPRTYQDRLQVAPSSPF
TVPSGQTQASVSEACLGGSSFCPTPSKEQTCSGREPASSSRASSDHSRADGYAGAGRTLL
RKSPSIRGSLEEREEDGGVTPSALPYTSPDAVVREWLGNIPEKPVFMTYEMAGETTEVPN
DGPEGPKEDLGDGCSLKVLGELTQARQQPPEEVTDEHPEPAEVLSGPGSVCSKMGGDLHP
DATPGERLKAPAESGIGEGTIADHGVSLCALPTRISTSTQIMKALLGSKPGRPSSLPEVS
STVAQRLSSSAEALIACLAKLHFFDEGLGPLDGKVRLEESPKYQEMLSISQTLWPGSELG
QGQLDFGLRGLTSHQALLGTEDFTPSSSSGVDVSSGSGGSGESSVPCVTENTLAPEKIDL
PLKIPSQRPDSRSQEYTELETHSTVSSGSQVRACATSGEEAGKGGRKQTWGSAPEESVES
TMLEGNAQSEETEARVRERLQENSVHGKELPEEGARVCSQEMLAAGSQDGAGSPEDTRVP
KDDAGTDAASGELGPLDGREEHTESPQHFNEGNSRVSEHQGARILELGLEEMPRVGARGC
KQACIKASSGTRETNTSMAHKGSLDPDPIWVFKLLKKIEKAFMAHLADATAELRARWNLH
DNNLLDQMVTELEQDVGQRLQASTVREIRKIQSRAGKTVPEPPREALRGQTSLQTEQRRR
RLQGLRNLSALPGQGALSLTLEDGPTALGIRSDSGPVEDEFCPCEICLKKKRTPRFPKDA
TTVSGAPVRKAFDLQQILQSKKGGSSSREAIEVAPQKTGMMLSQEDPRTDQGADEKQGLR
LAQGLGVTEGEEGEGEQRLKAEQGTEILKTEGSGCHVLEEDTATEEDGKICIGTVQESQQ
LEGTEIRKEETLHQSLRDEGNSEAPAGEGAHSMEIQEASTDRQTEVESKSQDVKKDSPWV
SSGESQERVGSDNTSLDQEGRLPNHYQRPVPQSHYTECSSRASSLDNCSQVSQKGSDGDF
LRDLKRTKAKNSRILHAERKVPIMYPESSSEQEEAPSSPQPPKQGKGEDEQSAGSVAHTQ
VGDRVDGFGQDDLDF
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccccaggagacacaagggatgctcctgcaccaagccagcctgcaccaagc
caccggcagtgtctcctgccctctgtggctcacactccctccgttactgaggtgacaccg
gccaagaagataaccttcctcaagcgaggagatccccagtttgctggggttcgcctggct
gttcaccagcgcactttcaagaccttcagcgccctaatggatgagctgtctcagcgcatg
cctctttcctttggggtgcgttctgtcaccacaccccggggtttgcatggcctcagtgcc
ctggagcagctgcaagatgggggctgctacctctgctctgataggaagccccctaaaact
ccaagagacacaggccagcttcaacggaaaagcccctctgctgggcagtcacaggttttt
gaaggtggcggtgaagccccagtaacatcctattcctggaagggtcccagggccccaagg
aggctgacactggtgaagaatggggatcctagatgccagcagacagtggttctcagtcac
aagaacaccaggaatctggcagcctttctcagcaaagcctctgagcttctacgctttcct
gtcaaacaggtgtacacaatctgcgggaagaaggtggactctctgcagacactcctggat
ggcccctccctgctggtatgtgctgggaacgaggccttcaaacgtctggagatggaaaat
gagagagggaacaggaccagaatgttatctggtgtgactgcaaggaatgaacgtggttgc
tggggaccaaacaccaagcagagtgtcatacactcgaggggcagatctggcggcaagctg
cggcagttttccttggcttcagagaggtctggtctcagtgaccatccagcatctggtcat
caagcctgggcaggacctgctttggacaggtgccctcaggacacacctgccccacctggt
tccttggtggctgctgatggtgtagagaagaaggtctgcatgaatgaggatggcagtctg
tctgtggagatgaaagtccgcttccagcttctggatgaggacaccctgcggtggtcccag
agggtgggggtggggcatgccagtgtcttcgcaggagccagtggagagggtcaggacctg
agggaggctgacaggttctgttgcagacaggagggctacccttggggcatcttagagcct
ggggcacagggactgggtccctatgatggaggatgccagggagcttttgatgtgggccag
cagtcacggcccagctatgacatatggaggaatcccctgactgcccctgagggcacaagg
ccaacacctcgaaggagatggggtctggctaagctctctagatgcaagaaccactggaga
cagggggccagtgataggaaaggacatggcaaagataattccagcccagtctcgactcgt
aggcatcctagaagtgtccagccaggctcctgctgtccttggactccagaaggtgagaca
ggcagtgacaccttgcaaccagtctcctcagcttcttcccaaagtgagactgagctggaa
tctggtgagagcccctgcttacaggacacaggaccccgtggattgagacctgagacccaa
agtataaaaagagccctttctgatacatcagtcaatgtcgagtcttgtggggagtctagt
gagggtggtggtcagctccacagaggctcaagccaggcaagggtcatggcttcccagggg
caagtcaccaaaggtgacaacccctatatttccacccagagtcacttacctttgaaccac
ccgggtcttcagacagagaagtatagtgagggcaccaggtggcgggaggtcagaggtgag
cctgtactgagactgcccctggttccgggccattctggttctcagaacacacagagagat
gctctcccagttcctgcccgtgccccagcccagcggaggcaaagaaagcagaagaggcca
gctggtgttgtgtgcttgcccagtgtctctgccccttaccaagtggctcagaaaggccat
gccgggcagtgttaccattgcagggacactcaatcctcactggacacagccttgcaaatg
ccagtgcctccggaaagagaacaagcctgcccaggaagcccagcacagcaatttccttca
aactcatccagtgcagaaaaccaggccgaggatctgagatccccatgctctagttctctt
gattttcgggaaacacaagccaccagcaaagccgccaccatggctatgagtgactcagac
tgtgtttccagcttttgtcatcccagcactcactctgcagagccagtaggggacaccaag
tgccaggctcactcatcaactccctcacctgtccacagagaagaggttggttgcctgcgg
gacacggcagggaccacccctgagcctttctcatcctctgtgctaccggacagatggcct
gaggcagaagatccaagaacctaccaagatcgcttacaggttgcaccatcttctcccttc
acagtccccagtggtcagacacaggcctctgtctctgaggcctgcttagggggaagtagt
ttctgcccaactccatccaaggaacaaacatgttctggaagggagcctgcaagcagcagt
agagccagcagtgaccacagtagagccgatggctatgcaggggccgggaggactctgctg
aggaagtcccctagcatcaggggaagccttgaggagcgggaagaggatggtggagtgaca
cccagtgctctgccttacacctctccagatgctgtggtccgtgagtggctaggcaacatc
ccagaaaagccggtattcatgacatatgagatggcaggtgagaccacagaggtgcccaat
gatggcccagaaggtcccaaggaggacctgggcgatggctgttctttgaaagttctgggg
gaactgactcaggccagacagcagcccccagaagaggttactgatgagcacccagagcca
gcagaagtcctctcaggacctggttctgtgtgctccaaaatgggaggtgatctgcatcca
gacgcaacaccaggtgaaagactcaaggctcctgcagaatctggaataggagaagggacc
atagcggaccatggtgtgagcctatgtgcactccccaccaggatctcaacctctacacag
atcatgaaggccttgctaggctccaagccaggccggcccagcagtctaccagaggtctct
agcacagtagcccagaggctcagcagctctgctgaggcccttattgcctgccttgccaag
ctccatttctttgatgagggtctggggcccctggatggcaaagtgaggcttgaagagtcc
cctaagtaccaggagatgctgagtatctcccagaccctgtggcctgggagtgagcttggg
caaggccagctggactttggcctcagaggactcacttcacaccaggctctgttggggact
gaggacttcacacccagctcctcttctggtgtggatgtgagtagtggctctggaggctca
ggtgagagcagtgtgccctgtgtcacggaaaataccctggctcccgagaagatagatttg
cccttgaaaatcccctctcaaagacctgattccaggagccaggagtacacagagctagag
actcattccacagtctcatctggctctcaggtaagggcttgtgccaccagtggggaggag
gcaggtaaaggaggcaggaagcagacgtggggcagtgccccagaagaatcggtcgaaagc
acgatgctggaagggaatgcacagtcagaagaaacagaagcgagagtaagagaaaggcta
caggaaaacagtgtccatggaaaagagcttccagaagaaggggctagggtctgcagtcag
gaaatgcttgcagctggctctcaggatggggcagggtcgccagaagacaccagagtgcca
aaagatgacgcaggaactgatgcggcctctggagaactgggacccctagatgggagagag
gaacacacagagtcccctcagcatttcaatgagggcaactcaagggttagtgagcatcaa
ggtgctcgcatactggagcttggattggaagagatgcccagagtgggcgcaaggggctgc
aagcaagcctgcatcaaggccagctcaggaaccagggagacaaacacatccatggcccac
aagggatctctggaccctgacccaatctgggtgttcaagttgctgaagaagatagagaaa
gccttcatggctcacctggctgatgccacagctgaactccgagcccgatggaaccttcat
gacaacaacctgctggaccagatggtgacggagctggagcaggatgtgggccaacggttg
caggcaagcactgtcagggaaatcagaaagatccagagccgggcagggaagacggttcca
gaaccaccccgggaagccctcagaggccagacgtctttacagacagagcagcgcaggcgt
cgccttcagggcttgcgcaacctctcagccctccctggccagggtgccctctccctcacc
ctggaggatgggcccacagccttaggaatcaggtcagattcagggcctgtggaggatgag
ttctgtccctgtgaaatctgtctgaagaagaagaggacccctagattcccaaaggatgcc
acaacagtctctggtgctccggtcagaaaagcctttgacctacagcaaattctacagagc
aagaaaggaggaagcagtagtagagaggccatagaggtggcccctcagaagacagggatg
atgttgtctcaggaggaccccagaactgaccagggagctgatgagaagcaagggctgagg
ttggcacaagggcttggggtaactgagggagaggagggggaaggggaacagaggctgaaa
gcagagcagggtactgagattttgaaaacagaaggatctggttgccatgtactagaagag
gacacagccactgaggaagatgggaaaatctgcattggcactgtccaagaaagccaacag
ctagagggaactgagatcaggaaggaggaaaccctgcaccagagtcttagagatgaaggc
aattcagaggctccagcaggagagggtgcccactctatggagattcaggaagcttctaca
gacagacagacggaggtagaaagcaaaagtcaagatgtaaagaaagacagcccttgggta
agctcaggagagagccaggaaagggtgggatctgacaacaccagcctagaccaagagggg
aggctcccgaaccactatcaaaggccagtcccccagagccactacacagaatgctcctcc
agggcatcgtctctggacaactgctcacaggtgtctcagaagggctcagatggagacttt
ctaagagacctcaagcgcaccaaagccaagaacagcaggatcttacatgcagagaggaaa
gtccccataatgtatccagaaagttcttctgagcaagaagaagccccctccagcccacag
cctccaaagcaggggaaaggggaagatgagcaatcagctggaagcgtggctcatacccag
gttggggatagggtagatggctttggccaggacgacttagatttctag
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