Arvicanthis niloticus (African grass rat): 117705352
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Entry
117705352 CDS
T08817
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03015
mRNA surveillance pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117705352 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
117705352 (Acin1)
03015 mRNA surveillance pathway
117705352 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117705352 (Acin1)
03041 Spliceosome [BR:
anu03041
]
117705352 (Acin1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117705352 (Acin1)
Spliceosome [BR:
anu03041
]
Complex C
Other components
EJC/TREX
117705352 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
117705352
NCBI-ProteinID:
XP_034353819
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All DBs
Position
3:64582960..64628405
Genome browser
AA seq
1338 aa
AA seq
DB search
MWRRKRPNSSGGTRGILSGNRGVDYGSGRGQFGPFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMTHPEGVA
SLLPPDFQSSLDRPELELSTHSPRKSSSFSEEKGESDDEKPRKGERRSSRVRQARAKLPE
YSQAAEEEEDQETPSRNLRVRADRNLKMEEEDEEEEEDDEEEEEEVDEGQKSRAAEAPIL
KQSEDEEREDMSRAKPENVVDEKPPIIRSQEKDELEKGGRVTRSQEEARRSHLARQQQEK
ETQIISLPQEENEVKSSQGLEEKSQSPSPPPLPEDLEKAPVVLQPEQIVSEEETPPPLLT
KEASSPPTHIQLQEEEEIEPVEGPAPPVLIQLSPPNTDAGTREPIMSPHTMQLVRSLSPL
SSTTDTKAESPAENVSDESILPLTQKSILPEYSAQKGIETEHEKSAPLLPLTVEELAPAK
GITEEPMKKQSLEQKESRRASHTLFPDHSLKQLADSSSSRSSSPSSSSSRSRSRSPDSSA
SRPQSSPRSKQRDVSQARVHANPHDRPKVGSRSTSESRSRSRSRSRSASSSSRKSLSPGI
SRDSNTSYIETKDPSCGQEAAALSGPQLQVLEPKEKAPMFSASVRGRHLSQPEPEQKHMI
QRLQPEQGSPKKCEAEEAEPPAATQPQTSETQISHLPESERIPHTIEEKEEVAMDTSENR
PENEVAEPPMPIADQVSSDDRPEGGAEEEEKKESSMPKSFKRKISVVSATKGVQAGNSDT
EGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISED
ETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPEAEPPVPPQVSVEVALP
PPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVR
PFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKF
LCADYAEQDELDYHRGLLVDRPSETKTEEQGAPRPLHPPPPPPVQPPPHPRAEQREQERA
VREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEK
AQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERAKEREKRRKEREEEEQK
EREKEAERERNRQLEREKRREHSRERERDRERERDRGDRDRDRERDRDRGRERDRRDTKR
HSRSRSRSTPVRDRGGRR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacgaccgaacagttccggaggaacccggggaattctgagcggtaat
agaggggtagactatggcagtgggcggggccaattcggtccgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggctctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaacaccccatgctgca
ttccagccaaattcacagattggggaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgggaagctcgggaggctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgacccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggacagaccagagctggaactcagcaca
cattcaccccgaaagagctcctctttttctgaagaaaaaggtgaatctgatgatgagaaa
ccgaggaaaggagaaagacgatcatccagggttagacaggcaagagctaagctccctgag
tacagtcaggctgctgaggaggaagaggatcaagagacaccatctagaaacctgagagtc
agagcagatcgaaatttaaaaatggaggaggaagatgaggaggaagaagaagatgatgaa
gaagaggaagaggaggtagatgagggacagaaatctagagcggctgaggcaccaatcctg
aaacagtctgaggatgaagagagggaagacatgtccagagcaaaaccagaaaatgtagtg
gatgagaaacctccaatcataagatcccaggaaaaagatgagttagagaaaggagggcga
gttacaagatcccaggaagaagctagaagaagtcatctggccagacagcaacaagagaaa
gagacacagattatttctctccctcaagaagaaaatgaggtaaaatcttcacaaggtttg
gaagaaaaatcccagtctccttcccctcctccgcttcctgaagacctagagaaggcccct
gttgtgctgcagccagaacaaatagtcagtgaagaggaaacacccccacctttacttact
aaggaagcgtcatctccaccaactcatatacaactccaggaagaggaagaaatagagcca
gtggaaggcccagcaccccctgttctcattcagttatctcctcctaatacagatgctgga
accagggagccaataatgtctcctcataccatgcagctggtaagaagcctgtctcctttg
tcaagtactacagataccaaagcagagtctccagcagagaacgtgtcggatgagagcatc
ctgcctctcactcagaaaagcatactgcctgaatactcagcccagaagggtattgaaact
gagcatgaaaagtctgctcccctcctccctctaactgtagaggagttagcacccgccaaa
gggatcactgaggaacctatgaagaaacaatctttggaacagaaggagagcagaagagcg
tcccacactctcttcccagaccacagtttgaaacagttagctgactcctcctcgagccga
tcatcctcaccttcatcctccagctctagatccagatctcgatctcctgacagttcagct
tcccgcccacagtcatctccaagatctaaacagagagatgtatcccaagcacgagttcat
gccaaccctcatgatagacccaaggtgggctccaggtcaacatcagagtccaggtcacgg
tcccgatctcgttcccggtctgcatcaagcagcagcagaaaatctctgagccctggaatc
tccagagacagcaacaccagctacattgaaaccaaagatccctcctgtggtcaggaggct
gcagctctatccgggccacagctgcaggtccttgaaccaaaggagaaggctcccatgttc
tcagcctctgtccgggggaggcatctgagccagcctgagccagagcaaaagcacatgatc
cagaggttacagccagagcaggggagcccaaagaagtgtgaagctgaggaggcagagcca
ccagctgccacacagcctcaaacctcagagactcagatctctcatctaccagaatcagaa
aggattcctcacaccattgaagagaaggaggaagtagccatggacaccagtgaaaacaga
cctgaaaatgaggttgcagagcctcctatgcctattgcagatcaagtcagcagtgatgat
cgcccagaggggggtgctgaagaagaggagaagaaagagagttcgatgcccaaatcattc
aagaggaaaatctccgttgtctcagctaccaagggggtgcaagctggaaacagtgacaca
gaggggggccagcctggtcgaaaacgtcgttggggagccagtactgctacaacacagaag
aaaccttctatcagtatcaccactgaatcactcaagagcctcatccccgacatcaaaccc
ctggcggggcaggaggctgttgtggatcttcatgctgatgactcccgaatctctgaggat
gagacagagcgtaatggtgacgatgggacccatgacaaaggactgaaaatatgccggaca
gtcactcaggtagtacctgcagagggtcaggagaatgggcagagggaagaagaagaagag
aaagagcctgaggcagagccccctgtgcctccccaggtgtcagtggaggttgccttgccc
ccacctgtggagcatgaagtaaagaaagtaacattaggagataccttaacccggaggtcc
attagccaacagaagtctggagtttccattacaattgatgacccagtccgaactgcccag
gtgccctcccctcccaggggcaagatcagtaacattgtccacatctccaacttggtccgt
cccttcactttgggccagctgaaggagttactggggcgcacaggaactttggtggaagag
gctttctggattgacaagatcaaatctcattgcttcgtgacgtactcaacagtagaggaa
gctgttgccacccggacagctctgcatggggtcaagtggccccagtccaaccccaagttc
ctctgtgctgactatgctgagcaagatgagctggactatcaccggggactcttggtagat
cggccatctgaaactaagacagaggaacagggagcaccaaggcccctgcatccccctccc
ccacccccagtccagccaccaccccacccccgggctgagcagcgggagcaggaaagggca
gtgcgagagcagtgggcagagcgggaacgggaaatggagcggcgggagaggactcggtct
gaacgggaatgggatcgggacaaagttcgagagggacctcgctcccgatcgcggtcccgt
gaccgccgccgcaaggagcgagcaaaatctaaagaaaagaagagtgagaagaaagaaaaa
gctcaggaggagccacctgccaagttgctggacgaccttttccgtaagactaaggcagct
ccctgcatctattggctccctctgactgagagccaaattgttcagaaggaggcagagcaa
gctgaacgggccaaggagcgggagaagcggcgaaaagaacgagaagaagaagaacagaag
gaacgtgagaaggaagctgagcgggaacggaaccgacagctagaacgagagaaacggagg
gagcacagcagagagagagagagggacagggagagagagagggacaggggtgaccgagat
cgggatagggaaagagaccgggaccgaggcagggaaagggatcgcagagacaccaagcgc
cacagcagaagccggagtcgaagcacacctgtacgggaccggggtgggcgccgctag
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