Arvicanthis niloticus (African grass rat): 117705375
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Entry
117705375 CDS
T08817
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1-like isoform X1
KO
K14217
interferon-induced protein with tetratricopeptide repeats 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
117705375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_7
TPR_14
TPR_17
TPR_11
TPR_10
TPR_CcmH_CycH
TPR_16
TPR_MalT
TPR_15
ARM_TT21_C
TPR-S
TPR_6
ANAPC3
ARM_TT21_5th
RPN7
TPR_Slam
HAT_Syf1_M
ARM_TT21_4th
HAT_Syf1_CNRKL1_C
SNAP
Motif
Other DBs
NCBI-GeneID:
117705375
NCBI-ProteinID:
XP_034353872
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All DBs
Position
1:complement(141415107..141484434)
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AA seq
462 aa
AA seq
DB search
MSEETRRSLLRDCLVELRCHFTWELVIENVDMPDLEIRISETEFLDTNYSIGMHNLQAYL
SHLKGQQDQALQSLKEAEALIQREQLGKRSLVTWGNCAWVHYHRGSLDETQIYLDKVKKV
CKEFASPFCYRIECAEMDCEEGWALLKCGKQYYKRALDCFARALEEEPDNPEFNTGYAVV
AYRLDHNEGTSLEPLRKAVSLKPEDPYTKVLLALKLQDLGKADEAEIHIEEALPRISQNY
IFGYVAKFYRRKGFVEEALNFFERALQTNPLSTYLHFQIGLCHQRQLFQIKEAANMHPRG
KDRERADQSIHLAIRYFEKTLELKPTYEIAYVNLAEMYSEIGQLEKAEEIFQKVLSMSNL
EEHMQQEIHLRYGRFQQFHVKSEQRAITHYLKGLKIEATSHSRDKLLKALEKLVERRIHQ
NSRVLESWSLLGFVYKLKGDTSEALSCYEKALRLTGKLNPEF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaactcgtagaagtctcctacgtgactgcctggttgagctcagatgccac
tttacctgggagttggttatagaaaatgtggacatgcctgatttggaaataagaatctca
gagactgagttccttgataccaactatagcatcgggatgcacaacctccaggcctacctg
agccacctgaaaggccagcaggaccaagccctgcagagcttgaaagaagctgaagccttg
atccagagagagcagttgggcaagagaagcctggtgacctggggcaactgtgcctgggtg
cattaccacaggggcagcttggatgaaacccagatctacctggacaaggtgaagaaggtt
tgcaaggaatttgcaagtcccttctgctacaggatagagtgtgctgagatggactgtgag
gaaggctgggccttgctgaagtgtggaaaacaatattataaacgagccctggactgcttt
gcaagggctctggaagaggagccagacaaccctgagttcaacactggctatgcagtggta
gcctatcgcctggatcacaatgagggcacttctctggaacctctaaggaaggctgtcagc
ttaaaaccagaagatccatacactaaagttctccttgccttaaagcttcaggatttagga
aaagcagatgaagcagaaatacacattgaagaagctctgcccagaatatcccagaactat
atctttggatatgtagccaaattttaccgaaggaaaggttttgtggaagaagctcttaac
ttctttgaaagagccttgcagacgaatcctttatccacctacttgcatttccagattggt
ctttgccatcagagacaactgtttcaaataaaggaagctgcaaacatgcatcctagaggg
aaagatagagaaagagcagaccaatccattcatttggctatacgttattttgaaaagact
ttagaactgaaacccacatatgagatagcttatgttaatctggccgaaatgtactcagag
attggtcaacttgaaaaggcagaggaaatttttcagaaagtgttgagcatgagtaacttg
gaagagcatatgcagcaagagatccatttacgctatggccgcttccaacaattccatgtc
aaatcagaacagagagccatcacccactacttaaaaggcctgaaaatagaggcaacttct
cactccagggataaactgctcaaggctttggagaagctagttgaaagacgaattcaccag
aatagtcgtgtcctggaaagctggagcctccttggttttgtctacaagctgaaaggggac
acaagtgaagccttgtcatgctatgagaaggccctgaggctcacaggaaaactgaaccca
gagttttga
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