Arvicanthis niloticus (African grass rat): 117705422
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Entry
117705422 CDS
T08817
Symbol
Gpc6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
anu00535
]
117705422 (Gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
117705422 (Gpc6)
Proteoglycans [BR:
anu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117705422 (Gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
Others
117705422 (Gpc6)
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GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
117705422
NCBI-ProteinID:
XP_034353957
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Position
3:complement(6325411..7326457)
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AA seq
555 aa
AA seq
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MPSWIRAVILPLSGLLLTLPAAADVKARSCSEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDERVTAGTSNDE
ECWNGHSKARYLPEIMNDGLTNQINNPEVEVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREEESSALKLSSSLTS
WSLVCVVLTLQRLYR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatccgggctgtgattcttcctctctccgggctgctgctgaccctcccg
gccgcggcggacgtgaaggctcggagctgcagcgaggtccgtcaggcttacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggggagcatctacgcatctgc
cctcaggaatatacctgctgcaccacggaaatggaagacaagttaagccaacagagtaaa
ctggagtttgaaaaccttgtagaagagacgagtcattttgtgaggaccacgtttgtgtca
aggcacaagaagtttgatgaatttttccgagagctgctggaaaatgcagagaagtcccta
aatgacatgtttgtccggacctatgggatgctgtatatgcagaattcggaggtattccag
gacctcttcactgagctaaagaggtactacacaggaggtaacgtcaacctggaggagatg
ctcaatgacttctgggctcggctcttggaacggatgttccagctgataaacccccagtat
cacttcagcgaggactacctggaatgtgtaagcaagtacacagaccagctcaagccattt
ggagatgtgccacggaaactgaagattcaggtcacccgtgctttcattgcggctcgcacc
ttcgtccagggcctgacagtgggcagagaagttgccaaccgagtttccaaggtgagcccc
acccctgggtgcatccgggctctcatgaagatgttgtactgcccctactgccgaggtttg
cccactgtgagaccttgcaacaactactgcctcaacgtcatgaagggctgcctggccaac
caggcggatttggacactgaatggaatctcttcatagatgcaatgctcttggtggctgag
cgactggaagggccgttcaacattgagtcagtcatggacccaatagacgtcaagatctct
gaagccattatgaacatgcaggagaacagcatgcaggtgtcggcgaaggtctttcagggc
tgtggccagcccaaacctgctcccgctctcagatctgctcgctcagctccagaaaatttt
aatacccgttttcggccctacaaccctgaggaaagacccacaactgcagcaggcacaagc
ttggaccggctggtcacagacataaaagagaaactgaagctctctaaaaaggtctggtca
gcattgccctacacaatctgcaaggatgagcgtgtgacagcaggaacctccaacgacgag
gagtgctggaatggacacagcaaagccagatacttgcctgagatcatgaacgatgggctg
accaaccaaatcaataatcctgaggtggaggtggacatcacgcggccagacacgttcatc
agacagcagatcatggctctccgcgtgatgaccaacaaactgaagaatgcgtacaatggc
aatgacgtcaacttccaagacacaagtgatgaatccagtggctcaggcagcggcagtggt
tgcatggatgatgtgtgtcccacggagtttgagtttgtcaccaccgaggccccagcggtg
gacccagaccgcagagaagaggaatcttcggccttgaagcttagctcctccctgacgtcc
tggtctctggtctgcgtggtcttgaccctgcagagactctacagataa
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