Arvicanthis niloticus (African grass rat): 117705487
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Entry
117705487 CDS
T08817
Symbol
Gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117705487 (Gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117705487 (Gtf2f1)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117705487 (Gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117705487
NCBI-ProteinID:
XP_034354069
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All DBs
Position
3:complement(137966610..137976169)
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AA seq
508 aa
AA seq
DB search
MAALGSSSQNVTEYVVRVPKNTTKRYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTAYYIFTQCADGAFEAFPVQNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRSRKKPSELRIHDLEDDLEMSSDASDASGDEGSRASKAKKKAPV
TKAGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSPDETEGKPKVPQQEDGPKG
VDEQSESSEESEEEKPPEEDKEEEEDKKAPTPQEKKRRKDSSDDSDSSEESDIDSETSSA
LFMAKKKTPPKRERKPSGGSSKGTSRPGTPSTEAASTSSTLRAAASKLEQGKRTSETPAA
KRLRMDTGSQSLSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQT
VNVLAQILKRLNPERKMIGDKMHFSLRE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctaggctccagcagccagaatgtcaccgagtacgtcgtccgagtccccaag
aacacaaccaaaagatacaatataatggcttttaatgcagccgataaagtcaactttgct
acctggaatcaggcacggctggagcgggatctgagcaacaagaagatctaccaggaagaa
gagatgccagagtctggtgcaggcagtgagttcaaccgcaagctcagggaggaggcgcgc
cggaagaagtatggcatcgtgctgaaggagttccggcctgaggaccagccttggctactc
cgtgtcaatggcaaatccggaaggaagttcaagggcataaagaaaggcggggtaacagaa
aacacggcttactacatcttcacacagtgtgcggatggtgccttcgaggccttccctgtg
cagaactggtacaatttcacaccgctggcccggcaccgcacactcactgctgaggaagcc
gaggaggaatgggagaggaggaacaaggtcctgaaccacttcagcatcatgcagcagcgg
cgactcaaggaccaggaccaggatgaagatgaggaggagaaggagaagcgcagtcgcaag
aagcctagtgagctgcgcattcatgacctagaagatgacctggaaatgtcctctgatgcc
agcgatgccagtggcgatgagggcagcagagcctccaaggctaagaaaaaggccccagtg
accaaggcaggcaggaagaagaaaaagaagaagggctcagatgatgaggcttttgaggac
agcgatgatggggactttgagggccaggaggtagactacatgtctgatggctccagcagc
tctccagatgagacagagggcaagcccaaagtgccccagcaggaggatggccccaagggt
gtggacgagcagagtgagagcagcgaggagagcgaggaggagaagcccccagaggaggac
aaggaagaggaggaagacaagaaggccccgaccccacaagagaagaaacgcaggaaagac
agcagtgatgactcagacagctcagaagagagcgacattgacagtgagacctcctctgca
ctcttcatggcgaagaagaagacaccccccaagagggagcggaagccatcagggggaagt
tccaagggcaccagtcggccaggaactcccagtacagaagcagcaagcacttcttctacc
ctgcgggccgcagctagcaagctggagcaggggaagcggacaagtgagactccagcagcc
aagcgtcttcggatggacacgggttcccagagcctgtctgggaagtccacaccgagcagc
ggtgacgtccaggtgacagaggacgctgtgcggcgctacctgacccgcaagcccatgacc
acaaaggacctgctgaagaagttccagaccaagaagacagggctgagcagcgagcagacc
gtgaacgtgctggcgcagatcctcaagcgcctcaatcccgagcgcaagatgattggtgat
aagatgcacttctccctcagagagtga
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