Arvicanthis niloticus (African grass rat): 117705537
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Entry
117705537 CDS
T08817
Symbol
Hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
anu04940
Type I diabetes mellitus
anu05134
Legionellosis
anu05152
Tuberculosis
anu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117705537 (Hspd1)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
117705537 (Hspd1)
05152 Tuberculosis
117705537 (Hspd1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117705537 (Hspd1)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
117705537 (Hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117705537 (Hspd1)
03110 Chaperones and folding catalysts [BR:
anu03110
]
117705537 (Hspd1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117705537 (Hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117705537 (Hspd1)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
117705537 (Hspd1)
Messenger RNA biogenesis [BR:
anu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
117705537 (Hspd1)
Chaperones and folding catalysts [BR:
anu03110
]
Heat shock proteins
HSP60 / Chaperonin
117705537 (Hspd1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
117705537 (Hspd1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117705537 (Hspd1)
Exosomal proteins of other body fluids (saliva and urine)
117705537 (Hspd1)
Exosomal proteins of breast cancer cells
117705537 (Hspd1)
Exosomal proteins of colorectal cancer cells
117705537 (Hspd1)
Exosomal proteins of bladder cancer cells
117705537 (Hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
117705537
NCBI-ProteinID:
XP_034354138
LinkDB
All DBs
Position
3:127236005..127245942
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
DIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKG
KGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEAVVTEIPKEEKDPGMGAMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactacccacagtccttcgccagatgagaccagtgtcccgggcactggctcct
catctcactcgggcctatgccaaagatgtaaaatttggtgcagatgctcgagccttaatg
cttcaaggtgtagaccttttagccgatgctgtagctgttacaatggggccaaagggaaga
acagtgattattgaacagagttggggaagtcccaaagtaacaaaagatggggtcactgtt
gcaaagtcaattgatttaaaggataaatacaaaaatattggagctaaactcgttcaggat
gttgccaataacacaaacgaagaggctggggatggcaccaccactgccactgttctggca
cggtctattgccaaggagggctttgagaaaatcagcaaaggggctaatccagtggaaatc
cggagaggtgtgatgttggctgtcgatgctgtaattgctgaacttaagaaacaatctaaa
cctgtgacaacccctgaagaaattgctcaggttgctacaatttctgcaaatggagacaaa
gacattgggaacatcatttctgatgcaatgaaaaaagttggaagaaagggtgtcatcaca
gtgaaggatggaaaaaccctgaatgatgagctagaaattattgaaggcatgaagtttgat
agaggatatatttccccgtattttattaacacatcaaaaggtcaaaaatgtgaattccaa
gatgcctatgttttgttgagtgaaaagaaaatttctagtgttcagtccattgtacctgct
cttgaaattgctaatgctcaccggaagcctttggtcataatcgctgaagatgttgacgga
gaagctctaagcacactggttttgaacaggctaaaagttggtcttcaggttgtagcagtc
aaagctccagggtttggggacaataggaagaaccagcttaaagatatggctattgctact
ggtggtgcggtgtttggagaagaggggttgaatctaaatcttgaagatgttcaagctcat
gacttaggaaaagttggagaggtcattgtcaccaaagatgatgccatgcttttgaaaggg
aaaggtgacaaagctcacattgaaaaacgtattcaagaaatcactgaacagctagacatc
acaactagtgaatatgaaaaggaaaagctgaacgagcgacttgctaaactttcagatgga
gtagctgtgttgaaggttggagggacaagtgatgttgaagtgaatgagaagaaagacaga
gttacagatgctctcaatgctacaagagcagctgttgaagaaggcattgttctaggaggg
ggctgcgctctgcttcggtgcatcccagccttggattcattaaagcctgctaatgaagat
cagaaaataggtatagaaattattaaaagagcacttaaaattcctgcaatgacgattgct
aagaatgcaggtgttgaaggatctttaatagttgagaaaattctgcaaagttcctcagaa
gttggttatgacgccatgcttggagattttgtaaacatggtggaaaagggaatcattgat
ccaacaaaggttgtaagaactgctttactggatgctgctggggtggcctccttgctaact
acagctgaagctgtagtgacagaaattcctaaagaagagaaggaccctggaatgggtgca
atgggtggaatgggagggggtatgggaggtggcatgttctaa
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