Arvicanthis niloticus (African grass rat): 117705565
Help
Entry
117705565 CDS
T08817
Symbol
Tmtc4
Name
(RefSeq) protein O-mannosyl-transferase TMTC4 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
anu01003
]
117705565 (Tmtc4)
Glycosyltransferases [BR:
anu01003
]
O-Glycan biosynthesis
O-linked Man type
117705565 (Tmtc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TMTC_DUF1736
TPR_8
TPR_16
TPR_17
TPR_11
TPR_12
TPR_14
TPR_19
TPR_10
TPR_CcmH_CycH
TPR_Slam
TPR_9
TPR_15
ARM_TT21_C
TPR_6
TPR_MalT
TPR_NPHP3
NatA_aux_su
ANAPC3
FAT
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
117705565
NCBI-ProteinID:
XP_034354205
LinkDB
All DBs
Position
3:1540535..1599730
Genome browser
AA seq
773 aa
AA seq
DB search
MGLGGSRTPDKERAISNQHNAGSKGWWPAVFKMPELDADLDHIIPSVLPPFWAKLVVGFV
SLLCFARSYDGDFVFDDSEAIVNNKDLQSDTPLGDLWHHDFWGSRLSSNTSHKSYRPLTV
LTFRVNYYLSGGFHPVGFHVVNILLHGGISVLMLDVFSVLFGGLQYTSKGRRVHLAPRAS
LLAALLFAVHPVHTECVAGVVGRADLLCALFFLLSFLGYCQAFKETGNKEGTHSSTFWVL
LSIFLGAVAMLCKEQGVTVLGLNAVFDILVIGKLDILVAVRKVLHKDKSLENTGMLKNGG
LLFRMALLTIGGTSMLYIRWKIMGTGPPAFTEVDNPASFADSMLVRAINYNYYYSLNAWL
LLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWLCLIGLLFQALCSEDSCKRRILTLGL
GFLVIPFLPASNLFFRVGFVVAERVLYLPSAGYCMLLTFGFGALSRHTKKKKLVAAIILG
ILLINAMRCVIRSGEWRSEDRLFRSALSVCPLNAKVHYNIGKNLADQGNQTAAIKYYREA
VRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEE
AEQSYRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILL
DNTGNLAQAEAVGREALQLIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANPNVASY
HGNLAVLYHRWGHLDSAKKHYEISLQLDPVAVGTKENYSLLRRKLEQMQKKDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgggtggaagccgcaccccggacaaagagcgcgcgatttctaaccagcataat
gctggatccaaaggctggtggcctgcagttttcaagatgcctgagctggatgctgacttg
gatcacatcatcccatctgtccttccccctttctgggctaagttagtagtgggatttgtt
tcccttctgtgttttgcaaggagctatgatggagattttgtctttgatgactctgaagct
attgttaacaataaggacctccaatcagacaccccccttggggacctgtggcatcatgac
ttctggggcagtagactgagcagtaacaccagccacaagtcctacaggccacttactgtc
ctgactttcagggttaactactacctgtctggaggctttcaccccgtgggtttccatgtt
gtcaacatcctcctgcatggcggcatctccgtcctcatgctagatgtcttctctgtactg
tttggtggcctgcagtacaccagtaaaggccggagggtacacctggcccccagggcttct
ttgctggcagcattgctgtttgctgttcatccagtccacaccgagtgtgttgctggtgtt
gttggccgtgcagacctcctgtgtgccctgttcttcttgttgtctttccttggctactgt
caagcatttaaagaaacaggtaacaaggaggggacacattcttccaccttctgggtgttg
ctgagtatctttctcggagcagtggccatgctgtgcaaagagcaaggagtcaccgtgctg
ggcttgaatgctgtgtttgatatcctggtgataggcaaactcgacattctggtagctgtc
cggaaggttctacataaggacaagtccctagagaacactggcatgctcaagaatggaggc
ctcctcttccgaatggccctgctcaccattggaggcaccagcatgctttatatacgctgg
aaaatcatgggtacaggcccaccggcatttactgaggtggacaacccagcgtcctttgcc
gacagcatgttggttagggccataaactataattactactattcattgaatgcctggctg
ctgctgtgtccctggtggctgtgttttgattggtcaatgggctgcatccccctcattaag
tcagttggtgactggagggtaattgctctagcggcactttggctctgcctaattggccta
ctattccaagccctgtgctctgaggatagctgcaagagaagaatcctaactctgggtttg
ggatttcttgtgatcccctttcttcctgcaagcaacttgtttttccgagtgggctttgtg
gtcgcagagcgtgtcctctacctccccagtgctgggtactgcatgctgctgacctttgga
tttggagctctgagcagacacactaagaaaaagaaactggttgctgccatcatcctcggc
atccttctcatcaacgcaatgagatgtgtgattcgaagtggggagtggcggagcgaagac
cggctctttcgaagtgccctgtctgtgtgtcccctcaatgctaaggttcactacaacatt
ggcaaaaacctagctgatcaaggcaaccaaacagcggccatcaaatattatcgggaagca
gttagactgaatcccaagtacgttcatgccatgaataaccttggaaatatcttaaaagaa
aggaatgagctacaggaagctgaagagctgctgtcattggctgtccaaatacagccagac
tttgcagccgcatggatgaatttgggtatagttcagaacagcctgaaacgatttgaggag
gcagagcaaagctaccgaacagcaattaaacacaggcggaaatacccagactgttactac
aacctcgggcggctgtatgcagatctaaatcgccatgtggatgcattgaacgcttggaga
aatgccaccgtactgaagccggagcacagcctggcgtggaacaacatgatcatacttttg
gacaacacaggtaacttagcccaggctgaagccgtcggaagagaggcgctgcagttaatt
cctaatgatcactcccttatgttctcattggcaaacgtgctggggaaatcccagaaatac
aaggagtctgaagctttattcctcaaggcaattaaagcaaatccaaatgttgcaagttac
catggtaatttggctgtgctttatcatcgctggggacatctcgactcagccaagaaacac
tatgagatctccttgcagcttgaccctgtggcagtaggcaccaaggagaattacagtctc
ctgagaagaaagctagaacaaatgcagaagaaagatgtctga
DBGET
integrated database retrieval system
