Arvicanthis niloticus (African grass rat): 117705704
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Entry
117705704 CDS
T08817
Symbol
Als2
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05014
Amyotrophic lateral sclerosis
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117705704 (Als2)
05022 Pathways of neurodegeneration - multiple diseases
117705704 (Als2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117705704 (Als2)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117705704 (Als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
117705704
NCBI-ProteinID:
XP_034354267
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All DBs
Position
3:123438626..123505232
Genome browser
AA seq
1609 aa
AA seq
DB search
MDSKKKSSTEAEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDG
EVYSFGTLPWKSESAEICPSNPLLESALIGHHVVTVAAGSFHSGAVTESGAVYMWGENAA
GQCAVANQQYVPEPSPVSISDSETSPLLAVRILQLACGKEHTLALSLSREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPPQELKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAEKHASTATSPHPETLDEQEEVFENTVVEAELS
MGSGQPTGGSAISSQQSIVGTAEVSSARTAPSYPDTQAVTAYLQKLSEHSVRENHEPGEK
PPHVQPLVEEAVPDIHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYS
TTPCEVGTPSGSASPGPESLKDLREEQVKQESLQGKKSSSLMDIREEESEGGSRRLSLPG
LLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLP
RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKV
SNESGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTKTSVLLSCSK
LGYISRVTAGKDSFLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLENL
GTVTTVQLLQEVASRFSKLCYLIGQHGASLNSYLQGMKEARSLVIMKHSSLFLDSYTEYC
TSVSNFLVMGGFQLLAKPAMPITVVAGRLHNWTSPEYQKLQDSSSCYESLALHLGKKRKE
AEYTLSFWKTFPGKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQF
STHHVFPLATLWAEPLSEEAGSVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQAL
RGTSDFPLYGGGSSVQRQEPPISRSAKYTFYKDTRLKDATYDGRWLSGKPHGRGVLKWPD
GKMYSGMFRNGLEDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQ
DNMRHGHGLLRSGKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGHG
VVVTQFGLYYEGNFHLNKMAGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGY
FSGEWGSGIKITGTYFKPSLYESDKDKPKAFRKLGSLAVAADEKWRAVFDECWRQLGCES
PGHGEVWKAWDNIAVALTTSRRQHRDSPEILSRSQTQTLESLEYIPQHVGAFSVEKYDDI
KKYLIKACDTPLHPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRF
LFPELPEEGSTIPLSAPLPTGRRSFCTGKSDSRSGSPEPGYVVTSSGLLLPVLLPRLYPP
LFMLYALDNDREEDIYWECVLRLNKQPDIALLGFLGVQRKFWPATLSILGESKKVLPSTK
DACFASAVECLQQISTTFTPSDKLKVIQQTFEEISQSVLSSLQEDFLWSMDDLFPVFLYV
VLRARIRNLGSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagaaaagctcaacagaggcagaaggatccaaagaaagaggcctagtc
catgtctggcaggcaggatccttttctctgacaccagagaggttgccaggctggggagga
aagacagttcttcaggcggcacttggtgtgaggcatggagttcttctgactgaagatggc
gaggtctacagctttgggacccttccctggaaaagtgaatcagcagaaatttgtccaagc
aacccccttctagagagtgccctaattgggcatcacgttgttactgtggcagcagggagt
ttccacagtggagcagtgacagaaagtggggctgtgtacatgtggggagagaacgctgcc
ggtcagtgtgcagtagctaaccagcaatacgtgccagagccgagtcctgtcagcatttct
gactcagagaccagccctttgttagcagttaggattcttcagttggcatgtggcaaggaa
cacacactggcattgtcactcagccgagagatctgggcatggggcaccggctgtcagctg
ggactcatcaccaccaccttcccagtgacaaagccacagaaggtggaacaccttgctgga
cgagtggtgcttcaggtggcctgcggtgcattccacagccttgcgcttgtgcagtgcctc
cctccccaggaactgaagccagtcccagagagatgcaaccagtgcagccagctgctcatc
actatgacagacaaagaggatcacgtgataatatcagacagccattgctgccctttaggt
gtgacactgtcggaatctcaagcagaaaagcatgccagcactgctaccagccctcaccca
gagactctggatgagcaggaagaggtatttgagaacacagtggtagaagctgaactgagc
atgggaagtggtcagcccacaggtggcagtgccatttcctcccagcagagcatcgtggga
acagctgaagtgtcttctgccagaacagctccctcatacccagacacccaggcggtaact
gcatacctgcagaagctatcagagcattcggtgagagagaaccatgagcctggagaaaag
ccaccccatgtccagcctcttgtagaagaagcagttcctgatattcacagtccaccaact
acaagcacctcagccctcaacagcttggtggtctcctgtgcatctgctgttggtgtgaga
gtggctgccacctatgaagctggggccttgtccctcaagaaagttatgaacttttatagc
accaccccctgcgaggtgggaactccgtcaggcagtgcctccccaggcccagaaagtctg
aaagatctcagagaagagcaggtgaaacaggaatcactgcaagggaagaaaagctcaagt
ctcatggatatcagagaggaagagtcagagggagggagccgaagactctccctcccagga
ttgttgtcgcaagtttcccccaggctcttaagaaaggctgcaagggtgaaaactcgaaca
gtggttctgactcccacatacagtggagaagcagatgccctcctgccttccctgagaaca
gaggtgtggacctgggggaaaggcaaggaagggcagctggggcacggtgacgtcctgccc
aggcttcagccgttgtgtgtcaagtgtctggatggtaaagaggtgatccacctggaggca
ggtggctcccactctctcgcactcactgcgaaatctcaggtttactcatggggcagtaat
acgttcggtcagctcgggcattctgagtttccaacaacagttcctcgactctcaaaggtt
agcaatgaaagtggagtctggagtgtggctgcaggccaagactattccttgtttttagtg
gacacggaagacttccagcctgggctgtattacagtggccgccaggaccgtgctgaaggt
gacaccctgccagagaatcccagtggtacaaagacttcagtacttctctcctgtagtaag
cttggatatataagcagagtcacagcaggaaaagatagctttttagctttggtggacaag
aacatcatgggatacattgccagtctccatgagttggctactacggaaagacggttttac
tcaaaactcagcgaaatcaaatcacagatacttagacctcttctcagtttagaaaatttg
ggcaccgtgaccactgtccagctgttgcaggaagtcgccagcaggttcagcaagttgtgt
tacctcattgggcagcatggagcctcactgaacagctacctgcagggcatgaaggaagcc
aggagcctggtcatcatgaagcattcgagtcttttcttggacagttacacagagtactgt
acatcagtttcaaatttcctggttatgggaggattccagcttcttgccaagcctgccatg
cccatcactgttgtagcaggcagacttcataattggacatctccagagtatcaaaagctg
caggattccagttcttgttatgagtctcttgctctccatctcggcaagaagaggaaggaa
gcagaatacacactgagcttctggaagacctttcctggaaaaatgacggattccttgagg
aagccagagcgccggctgctctgtgagagcagtaaccgagccctctccctgcagcatgct
ggcaggttttctgtgaattggttcattctcttcaatgacgccctggtccatgctcagttc
tctacacaccacgtgttccctttggctaccctctgggcagagccactttctgaagaagct
ggtagcgtgaatggcttaaagataaccacacctgaagaacagttcacgctcatttcttca
acaccccaggaaaagaccaagtggcttcgggctatcagccaagctgtggatcaggctttg
agggggacatccgatttcccactttatggaggtggcagcagtgttcagagacaggaacca
cccatctcaagaagtgccaaatacactttctacaaagatacccgcctaaaggatgccact
tacgacgggcgctggctttcagggaagcctcatggcaggggtgttctgaagtggcccgat
ggaaagatgtattctggcatgttcaggaatggcctggaagatggatacggtgaatacaga
atccctaacaaggccctgaacaaagaagaccattatgtaggccattggaaagaggggaaa
atgtgtggacaaggagtctacagctatgcctctggtgaagtgtttgaaggctgctttcaa
gataacatgcgccatgggcatggtcttctccggagtgggaaactgacttcttcttctcct
agcatgttcattggccagtgggtgatggataagaaagcaggatatggtgtctttgatgat
atcaccaggggagagaagtacatgggaatgtggcaggatgatgtatgccaagggcatggg
gtggtggtcacccagtttgggttatactacgaaggcaacttccaccttaacaaaatggcg
ggaaatggggttttgctttctgaagatgatactatctatgaaggagaattttccgatgac
tggacgcttagtggaaagggaacactgactatgccaaatggagattatattgaaggttat
tttagtggagaatggggatctgggataaaaatcactgggacctacttcaaacctagcctc
tatgagagtgacaaggacaagcccaaagccttcaggaagctgggaagcctggcagtggcc
gcagacgagaaatggagagcagtgtttgatgaatgttggcgccagctgggctgtgagagc
ccaggtcacggggaagtgtggaaagcatgggataatattgctgtggccttgaccaccagc
cgtcgccagcaccgagacagtccagaaatactaagccgttcacagactcagaccctggag
agtttggagtacattccccagcatgtaggcgccttctctgtggagaaatatgatgacatc
aagaagtatttaataaaggcctgtgacactcctctgcacccactgggcaggcttgtggag
accctggttgcagtgtatagaatgacttatgtgggtgtaggggccaaccgccggttactg
caggaagctgtgaaggagattaagtcttatctcaagaggattttccagcttgtgaggttc
ttgtttcctgagcttcctgaagagggcagcacaatccccctctctgctcctctgcccact
ggaaggagatctttctgtactgggaaatcggattccagatccgggtcaccagagccaggt
tatgtagtaacaagttctggcttactgcttccggtgctgctgcctcggctctacccacct
ctcttcatgctctatgccctggataatgaccgagaggaagacatttattgggaatgtgtt
cttcgactaaacaagcagccagatattgctctcctgggctttcttggagtacagaggaaa
ttctggccagcaaccttgtcaatcctcggagagagtaaaaaggtgttgccaagcacaaag
gatgcttgttttgcatctgcagtagaatgtctgcagcagatcagcacaacatttactcca
tcagacaaacttaaggtgatccagcagacctttgaagagatctcccagagtgtcctgtcc
tcattacaggaggacttcctttggtccatggatgacttgttccctgtcttcttatatgtg
gtgctgcgggccaggattcggaatttaggctctgaagttcacctcattgaggacctgatg
gacccctatctccagcatggggagcaaggcataatgttcaccaccttgaaggcatgctac
taccagattcagcgtgagaagcttaactag
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