Arvicanthis niloticus (African grass rat): 117705763
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Entry
117705763 CDS
T08817
Symbol
Psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117705763 (Psmc6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117705763 (Psmc6)
09164 Neurodegenerative disease
05010 Alzheimer disease
117705763 (Psmc6)
05012 Parkinson disease
117705763 (Psmc6)
05014 Amyotrophic lateral sclerosis
117705763 (Psmc6)
05016 Huntington disease
117705763 (Psmc6)
05017 Spinocerebellar ataxia
117705763 (Psmc6)
05020 Prion disease
117705763 (Psmc6)
05022 Pathways of neurodegeneration - multiple diseases
117705763 (Psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
117705763 (Psmc6)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117705763 (Psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
TPR_MLP1_2
bpMoxR
AAA_lid_PRS2_C
AAA_28
DUF5906
TsaE
AAA_24
DUF3829_2nd
ATPase
NACHT
AAA_25
AAA_17
Occludin_ELL
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
117705763
NCBI-ProteinID:
XP_034354336
LinkDB
All DBs
Position
3:complement(72209121..72227189)
Genome browser
AA seq
389 aa
AA seq
DB search
MADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctagagataaggcgcttcaggactaccgcaagaagctgctcgagcacaag
gagattgacggccgtcttaaggagttaagggagcaattaaaagaacttaccaagcagtat
gaaaagtctgaaaatgatctgaaggcactacaaagtgttggacagattgtaggtgaagtg
cttaaacagttaacagaagaaaaattcattgttaaagcaacaaatggaccaagatatgtc
gtaggttgtcgtcggcagcttgataaaagtaagctgaagccaggaaccagagttgctttg
gatatgaccacactaaccataatgagatatctgccaagagaggtggatccattggtttac
aacatgtctcatgaggatcctggaaatgtatcttattctgagattggaggcctgtcagaa
cagattcgggaattaagagaggtaatagaattacctcttacaaatccagaattattccag
cgtgtaggaataatacctccaaaaggctgtttgctatatggaccgccaggcactgggaaa
acactcttggcacgagctgttgccagccagctggactgcaacttcctaaaggttgtatct
agttctattgtagacaagtacattggtgaaagtgctcgtttgattagagaaatgtttaat
tatgccagggaccaccagccatgcatcatttttatggatgaaattgatgctattggtggc
cgtcggttttctgagggaacatcagctgacagagagattcagagaactttaatggagtta
ctaaatcaaatggatggatttgatactctgcatagagttaaaatgatcatggctacaaac
agaccggatacactggatcctgctttgctgcgcccaggaagattagatagaaaaatacat
atcgatttaccaaatgaacaagcaagattagatatattgaaaatccacgcaggccctatt
acaaagcatggtgaaatagattatgaagcaattgtaaagctttcagatggctttaatggg
gcagacctgagaaatgtttgtactgaggcaggtatgtttgcaattcgtgccgatcatgat
tttgtagttcaggaagacttcatgaaagcagtcagaaaagtggctgactccaagaagcta
gagtcgaaactggactataaacctgtgtaa
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integrated database retrieval system
