Arvicanthis niloticus (African grass rat): 117705827
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Entry
117705827 CDS
T08817
Symbol
Kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X10
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04022
cGMP-PKG signaling pathway
anu04270
Vascular smooth muscle contraction
anu04911
Insulin secretion
anu04924
Renin secretion
anu04970
Salivary secretion
anu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
117705827 (Kcnma1)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
117705827 (Kcnma1)
04924 Renin secretion
117705827 (Kcnma1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
117705827 (Kcnma1)
09154 Digestive system
04970 Salivary secretion
117705827 (Kcnma1)
04972 Pancreatic secretion
117705827 (Kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117705827 (Kcnma1)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117705827 (Kcnma1)
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Ortholog
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
117705827
NCBI-ProteinID:
XP_034354433
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Position
3:complement(76336934..77028888)
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AA seq
1238 aa
AA seq
DB search
MANGGGGGGGGSSGGGGGGGGGGSGLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSS
SSVHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVC
CHCGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGR
VLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAAND
KLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSI
KLVNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDV
YAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITL
ESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLAR
VKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIP
SWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVS
NEMYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGT
LGFFIASDAKEVKRAFFYCKACHDDVTDPKRIKKCGCRRPKMSIYKRMRRACCFDCGRSE
RDCSCMSGRVRGNVDTLERTFPLSSVSVNDCSTSFRAFEDEQPPTLSPKKKQRNGGMRNS
PNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVL
SGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPK
VSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDS
IGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDD
DDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAE
ENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIY
RLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQS
SSKKSSSVHSIPSTANRPNRPKSRESRDKQNRKEMVYR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggtggcggcggcggcggcggcggcagcagcggcggcggcggcggcggtggc
ggcggaggcagcggtcttagaatgagcagcaatattcacgcgaatcatctcagcctagac
gcgtcctcctcctcctcttcctcctcctcttcttcttcttcctcctcctcttcctcctcg
tcctcggtccacgagcccaagatggatgcgctcatcatcccggtgaccatggaggtgccg
tgcgacagccggggccaacgcatgtggtgggctttcttggcctcctccatggtgactttc
ttcgggggccttttcatcatcttgctctggcggacgctcaagtacctgtggaccgtttgc
tgccactgcgggggcaagacgaaggaggcccagaagataaacaatggctccagccaggca
gatggtactctcaagccagtggacgaaaaagaggaggtggtggcagccgaggtcggctgg
atgacatctgtgaaggactgggcaggggtgatgatatctgcccagacactgaccggcaga
gttctggttgtgttagtctttgctctcagcattggtgcccttgtaatatacttcatagac
tcgtcaaacccaatagaatcctgccagaatttctacaaagatttcacattacagatcgac
atggctttcaacgtgttcttccttctctactttggcttgcggtttattgcagccaacgat
aagctgtggttctggctggaagtgaattcagtagtagatttcttcacagtccctcctgtg
tttgtgtctgtgtacttaaacagaagttggcttggcttgagatttttaagagctctcaga
ctgatacagttttcagaaattttgcagtttctgaatatccttaaaacaagtaattccatc
aagctggtgaatctgctctccatatttatcagcacatggctgactgcagctggattcatc
cacttggtggagaattcaggggacccatgggaaaatttccaaaacaaccaggcacttacg
tactgggaatgtgtctacttactcatggtcacaatgtctacagtgggttacggggatgtt
tatgcaaaaaccacgcttggacgcctcttcatggtcttcttcatcctcgggggactggcc
atgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatacggg
ggctcctatagcgcggttagtggaagaaagcacattgtagtgtgtggacacattactctg
gagagtgtctctaacttcctgaaggactttctgcacaaggaccgggatgatgtcaacgtg
gagattgtctttcttcacaacatctcccctaaccttgagcttgaggctctgttcaaacgg
catttcacccaggtggagttttatcagggctctgtcctcaatccacacgatcttgccaga
gtcaagatagagtcagcagatgcatgcctgatccttgccaataagtactgcgctgacccg
gatgcagaagatgcctccaacatcatgagagtcatctccataaagaactaccacccgaag
atcaggatcatcactcagatgctgcagtatcacaacaaggcccatctgctcaacatcccc
agctggaactggaaagagggtgatgacgcaatatgccttgcagagctcaagttgggtttc
atagcccagagctgtctggctcaaggcctctccacaatgcttgccaatctcttctctatg
aggtcattcataaagattgaggaagacacatggcagaaatactacttggaaggagtctcc
aatgaaatgtacacagaatatctctccagtgccttcgtgggtctgtccttccctactgtt
tgtgagctgtgttttgtgaagcttaagctcctgatgatagccattgagtacaagtctgcc
aacagggagagccgaatattaattaaccctgggaaccaccttaagatccaagaaggtact
ttaggatttttcatcgcaagtgatgccaaagaagttaaaagggcatttttttactgcaag
gcctgtcatgatgacgtcacagatcccaaaagaattaaaaaatgcggctgcaggcggccc
aagatgtccatctacaagagaatgagacgagcatgttgttttgattgcggacgttctgag
cgtgactgctcatgcatgtcaggccgtgtgcgtggtaacgtggacacccttgagagaacc
ttcccgctttcttctgtctctgttaatgattgctccaccagtttccgtgcctttgaagat
gagcagccgccaacactatcaccaaaaaaaaaacaacgtaatgggggcatgaggaactca
cccaacacctccccgaagctgatgaggcatgaccccttgttaattcctggcaatgatcag
attgacaacatggactccaatgtgaaaaagtacgactccactggaatgtttcactggtgt
gcacccaaggagattgagaaagtcatcttgactcgcagcgaagctgccatgacggtcctg
agtggccatgttgtagtctgcatctttggggatgtcagctcagccctcattggcctccgg
aacctggtgatgccgcttcgtgctagcaactttcactatcatgagctcaaacacattgtg
tttgtgggctccattgagtacctcaagcgggagtgggaaacactgcacaacttccccaaa
gtgtccatattgcctggtacgccattaagtcgggctgatttaagggctgtcaacatcaac
ctctgtgacatgtgcgttatcctgtcagccaatcagaataatattgatgatacttcgctt
caggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagc
atcggggtcttgcaggctaattcccaaggtttcacacctcctggaatggacagatcatcg
cctgacaacagcccagtgcacgggatgttacgccagccatctatcacaaccggggtcaac
attcccatcatcacggaacttgtgaacgatactaatgttcagtttttggaccaagatgat
gacgatgacccggacacagagctgtacctcacacagccctttgcttgtgggacagcattt
gccgtcagcgtcctggactcactcatgagcgcgacatacttcaatgacaatatcctcacc
ctaatacggaccctggtgacaggaggagccacaccagagcttgaggctctaatagctgag
gagaatgctcttcgagggggctacagcactccgcagacactagccaacagggatcgttgc
cgagtggcccagttagccctgttggatgggccctttgcggacttaggggatggtggttgt
tatggtgatctgttctgcaaagctctgaaaacatataacatgctttgttttggaatttac
cggctgagagatgcccacctcagcacccccagccagtgtacaaaaaggtacgtcatcacc
aatcccccctacgagtttgagctcgtaccgacagacctgatcttctgcctgatgcagttt
gaccacaacgctggccaatcccgggccagtctgtctcattcctcccactcctcacagtcg
tccagtaagaagagctcctccgtccactccatcccgtccacagcaaatcggccgaaccgg
cccaagtccagggagtcgcgcgacaaacagaacagaaaagaaatggtttacagatga
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