Arvicanthis niloticus (African grass rat): 117705847
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Entry
117705847 CDS
T08817
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03010
Ribosome
anu04120
Ubiquitin mediated proteolysis
anu04137
Mitophagy - animal
anu04140
Autophagy - animal
anu05012
Parkinson disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05167
Kaposi sarcoma-associated herpesvirus infection
anu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117705847
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117705847
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117705847
04137 Mitophagy - animal
117705847
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
117705847
05167 Kaposi sarcoma-associated herpesvirus infection
117705847
09164 Neurodegenerative disease
05012 Parkinson disease
117705847
05022 Pathways of neurodegeneration - multiple diseases
117705847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
anu03011
]
117705847
04121 Ubiquitin system [BR:
anu04121
]
117705847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117705847
Ribosome [BR:
anu03011
]
Ribosomal proteins
Eukaryotes
Small subunit
117705847
Archaea
117705847
Ubiquitin system [BR:
anu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117705847
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117705847
Exosomal proteins of colorectal cancer cells
117705847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117705847
NCBI-ProteinID:
XP_034354475
LinkDB
All DBs
Position
3:61882569..61900465
Genome browser
AA seq
173 aa
AA seq
DB search
MQIFVKTLTRKIIMLEAEPSDTIENVKAKIQDTEGIPPDQRRLIFAGKQLEDGRTLSDYN
IQKSTLHCVLRLCGGANKRKRKSYITPKKNQHKRKKVKLAVLKYYKGDENGRISRLHQVC
SDECGAGVFMGSRFDRHYCSDECGAGVFMGSRFDRHYCGKCCLTYCFKKPEDK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagacccttacaaggaagatcatcatgctcgaggctgaaccctca
gacaccatagaaaatgtaaaggccaagatccaggatacggaaggaattcctcctgatcag
cggaggctgatctttgctggtaagcagctggaagatggccgtactttgtctgactacaac
attcaaaagtctacccttcattgtgtgttgagactttgtggtggtgctaacaaaaggaag
aggaagtcttacatcactcccaagaagaatcagcataagaggaagaaggttaagttggcc
gtgctgaaatactataagggggatgaaaatggcagaatcagccgacttcatcaagtgtgt
tctgatgaatgtggtgctggagttttcatgggtagccgctttgacaggcattactgttct
gatgaatgtggtgctggagttttcatgggtagccgctttgacaggcattactgtggcaag
tgttgtctgacttactgcttcaagaaaccagaggacaagtag
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