Arvicanthis niloticus (African grass rat): 117705931
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Entry
117705931 CDS
T08817
Symbol
Nefm
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05014
Amyotrophic lateral sclerosis
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117705931 (Nefm)
05022 Pathways of neurodegeneration - multiple diseases
117705931 (Nefm)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117705931 (Nefm)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117705931 (Nefm)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
117705931
NCBI-ProteinID:
XP_034354607
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Position
3:51326136..51331506
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AA seq
881 aa
AA seq
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MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGADYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESTMVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDTLTAIAEELA
ASAKEEKEEAEEKEEEPEAEKSPVKSPEAKEEEEGEKEEEEGQEEEEEEDEGVKSDQAEE
GGSEKEGSSEKDEGEQEEEGETEAEGEGEEVEAKEEKKTEGKVEEVAVKEEIKVEKPEKA
KSPVPKSPVEEGKPKPEAKAGKVEKKEEEKVEEEKKEVTKESPKESPKESPKESPKESPK
ESPKESPKESPKESPKESPKEEKVEKKEEKPKDVPDKKKAESPVKEKAVEEVITITKSVK
VSLEKDTKEEKPQQQEKVKEKAEEEGGSEEEGGDQSPQESKKEDIAINGEVEGKEEEEQE
TQEKGSGREEEKGVVTNGLDVSPAEEKKGEDRSDDKVVVTTKVEKITSEGGDGATKYITK
SVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKEVTQGD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtcaccgagacc
cgctccagcttcagccgcgtgagcggttccccgtccagcggcttccgctcgcagtcctgg
tcccgcggctcgcccagcaccgtgtcctcctcctacaagcgcagcgcgctcgccccgcgc
ctcgcttacagctcggctatgctgagctcggccgagagcagcctcgacttcagccagtcc
tcatcgctgctcaacggcggctccggcgccgactacaagctgtcccgctccaacgagaaa
gagcagctgcaggggctgaacgaccgcttcgccggctacatcgagaaagtgcactacttg
gaacaacagaacaaggagattgaggcagagatccaggcgctgcggcagaagcaggcctcg
cacgcccagctgggtgatgcttacgaccaggagatccgagagctgcgcgccaccctcgag
atggtgaaccacgagaaggctcaagtgcagctggactccgatcacttggaggaagacatc
caccggctcaaggagcgctttgaggaggaggcgcggctgcgggacgacaccgaggctgcc
atccgcgcgctgcgcaaagacatcgaggagtcgacgatggttaaggtggagctggacaag
aaggtgcagtcgctgcaggacgaggtggccttcctgcggagcaatcacgaagaggaggtg
gccgacctgctggctcagatccaggcgtcgcacatcacggtagagcgcaaagactacctg
aagacagacatctccacagcgctgaaggagatccgctcccagctcgagtgtcactcagac
cagaacatgcaccaggccgaagagtggttcaaatgccgctacgccaagctcactgaggcg
gccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtaccggcgc
cagctgcagtccaagagcatcgagctcgagtcggtgcgaggcactaaggaatccctggag
cggcagctcagcgacatcgaggagcgccacaaccacgatctcagcagctaccaggacacc
atccagcagttggaaaatgagcttcggggaacaaagtgggaaatggctcgtcatttgcga
gaataccaggatctccttaacgtcaagatggccctggacatcgagatagccgcatacagg
aaactcctggagggtgaagagaccagatttagcacattttcaggaagcatcaccgggcct
ctgtacacacaccgacagccctcagtcacaatatccagtaagattcagaagaccaaagtc
gaagcccccaagctcaaggtccaacacaaatttgtggaggagatcattgaagaaactaaa
gtggaagatgagaagtcagagatggaagacaccctcacagccatcgcagaggagttggca
gcctctgccaaagaggagaaagaagaggcagaagaaaaggaagaggaaccagaagctgaa
aagtctcccgtgaagtctcctgaggctaaggaagaagaggaaggggaaaaggaagaagag
gaaggccaggaggaagaggaggaggaagatgaaggtgtcaagtcagaccaggcagaagag
gggggatctgagaaggaagggtctagcgaaaaagatgaaggtgagcaggaagaagaaggg
gaaactgaggcagaaggtgagggagaggaagtggaagctaaggaggaaaagaaaactgag
ggaaaggttgaggaagtggctgtcaaggaggaaatcaaagtcgagaagccggagaaagcc
aagtcccctgtgccaaaatcacccgtggaagaaggaaagccaaagccagaagccaaggcc
gggaaggttgagaagaaagaggaagagaaagttgaggaggagaagaaggaagtcaccaag
gaatcacccaaagaatcacccaaggaatcacccaaggaatcacccaaagaatcacccaag
gaatcacccaaggaatcacccaaagaatcacccaaggaatcacccaaggaatcacccaag
gaagagaaggtggagaaaaaggaggagaagccaaaagatgttccagataagaagaaggcc
gagtccccagtgaaagagaaggctgtggaggaggtgatcaccattaccaagtcagtaaag
gtgagcctggagaaagacaccaaagaggagaagcctcagcagcaggagaaggtgaaggag
aaggcagaggaggaggggggcagtgaggaggaagggggtgaccaaagcccacaggaatcc
aagaaggaagacatagctatcaatggggaggtggaaggaaaagaagaggaggagcaggaa
actcaggagaagggcagtgggcgggaggaggagaaaggggtggtcactaatggcttagac
gtgagccctgcggaggaaaagaaaggagaggatagaagcgatgacaaagtggtggtgacc
acgaaggtagaaaaaatcactagcgaggggggcgatggtgctaccaaatacatcaccaaa
tctgtaaccgtcactcaaaaggttgaagagcatgaggagacctttgaggagaagctggtg
tcaactaaaaaggtagaaaaggtcacttcacatgccatagtcaaggaagtcacccagggt
gactaa
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