Arvicanthis niloticus (African grass rat): 117705943
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Entry
117705943 CDS
T08817
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03410
Base excision repair
anu04140
Autophagy - animal
anu04217
Necroptosis
anu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117705943
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117705943
09143 Cell growth and death
04217 Necroptosis
117705943
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117705943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117705943
03400 DNA repair and recombination proteins [BR:
anu03400
]
117705943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117705943
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
117705943
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117705943
MMR (mismatch excision repair)
Other MMR factors
117705943
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117705943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
NOA36
Nop14
HMG_box_5
Nucleo_P87
ANAPC15
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
117705943
NCBI-ProteinID:
XP_034354619
LinkDB
All DBs
Position
3:complement(111551377..111552024)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTSREEHKKKHPDASVNFSEFSKKCSERWKTMSAKGKGKF
EDMAKPDKARYEREMKTYIPPKGETKKKFKDPNAPKGTPSAFFLFCSEYHPKIKGEYPGL
SIGDVAKKLGEMWNNTAADDKQFYKKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEDDEDDEEEEEEEEDEEEEEEDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccaagaggcaaaatgtcctcatatgcattctttgtg
caaacctcccgggaggagcacaagaagaagcacccagatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagactatgtctgctaaaggaaaggggaaattc
gaagatatggcaaagcctgacaaggctcgttatgaaagagaaatgaaaacctacatccct
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacctaaggggactccttcg
gccttcttcctgttctgttctgagtaccacccaaaaatcaaaggcgagtatcctggctta
tccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcggatgac
aagcagttctacaagaagaaggctgccaaactgaaggagaagtatgaaaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtagtcaaggctgaaaag
agcaagaaaaagaaagaagaggaagatgatgaggatgatgaagatgatgaggaagaggag
gaagaggaggaagatgaagaggaagaagaagaagatgatgatgaataa
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