Arvicanthis niloticus (African grass rat): 117706030
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Entry
117706030 CDS
T08817
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117706030 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117706030 (Bard1)
04121 Ubiquitin system [BR:
anu04121
]
117706030 (Bard1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117706030 (Bard1)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117706030 (Bard1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117706030 (Bard1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117706030 (Bard1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117706030 (Bard1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117706030 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT_2
BRCT
zf-C3HC4
zf-RING_5
ANK_LRRK2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117706030
NCBI-ProteinID:
XP_034354732
LinkDB
All DBs
Position
3:112454180..112521381
Genome browser
AA seq
760 aa
AA seq
DB search
MPRRPPRVCSGNKPPPVPAMAPATDGLWAHSRAALARLEKLLCCSRCANILKEPVCLGGC
EHIFCSDCISDCVGSGCPVCSTPAWILDLKINRQLDSMIQLYSKLQNLLHDNKVSDSKDD
TSRAHLFDDSKSKNSIKMWFSPRSKKVRYVVNKVSVQTQPQKTKDDKTQEASVYEFVSAT
PPVVTSKRAKTASRTSAKKHPKKAKVNQEGNFRPETNGSRFDSKEKLKEEKVVSYSHTPA
IESPRVNGEIDLLASGSVVESECSGSLTEVSLPLAEHIVSPDTVSKSEETPEKKICVKDL
RSLGNNGNHKGCQRPPTSTSKNCGSNIPSTSRDISAENVVLVDCSSLPSGRLQVDVTLNL
RKSNASDDPLSLSPGTPPPLLNNSTHRQMISSPSTVKLSSGIPTGKRNHRGETLLHIASI
KGDIPSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKVVELLLQHNALVNTTGYQNDSP
LHDAAKNGHIDIVRVLLSHGASRNAVNIYGVRPVDCTDNENIRSLLLLPEKNESFSTSQC
SVLNAGQRKNGPLVLIGSGLSSQQQNMLSKLETVLKAKKCAEFDHTVTHVIVPDEEAQST
LKCMLGILSGCWILRFAWVKACLDSKVREQEEKYEVHGGPQRSRLNREQLLPKLFDGCYF
FLGGNFKHHPKDDLLKLIAAAGGRVLSRKPKPDSDVTQTVNTVAYHARPDSDQRFCTQYI
IYEDLLNCHPERVRQGKVWMAPSTWLISCIMAFELLPLDS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccggccgccgagggtctgctccgggaacaagcctcctcccgtgcccgccatg
gcaccggctaccgacgggctttgggcccacagccgcgcggcgcttgcccgcctggagaag
ctgctgtgctgctcccgctgcgctaatattctgaaggagcctgtgtgcttaggaggctgt
gagcacatcttctgtagtgattgtataagtgactgtgtcggatcaggatgcccagtgtgt
tccactccagcctggatcctagacctcaagataaacagacaattggacagcatgatccag
ctttatagtaagcttcaaaatttgctacatgacaataaagtttcagattcaaaagacgac
acatctcgggcacatttatttgatgattcaaaaagtaagaattcaataaaaatgtggttt
agccctcgaagtaagaaggttagatatgttgtgaataaagtgtcagtacaaacccagcct
caaaagacaaaggatgacaaaacccaggaagcctcagtgtatgaatttgtttctgcaact
ccccctgtagttacttctaagagggctaaaacagcttctagaacatctgcaaaaaagcat
ccgaagaaagctaaggtcaaccaggaggggaatttcaggccagaaacaaacggtagtaga
tttgattccaaagagaagctgaaggaagagaaggttgtctcctatagccacacaccagct
attgagagtccacgggtaaatggtgaaatagacttattagcaagtggctctgttgtagaa
tcggaatgttctggaagcttgactgaagtctctttaccattggccgagcatatagtgtct
ccagacactgtgagcaagagtgaagaaactccggagaagaagatctgtgtaaaagatctt
cgttcactagggaataatggaaatcacaaaggctgccaaaggcctcccacttctacttct
aagaactgtgggagcaacattccgagcaccagcagagatatcagtgcagaaaacgtagtt
ttggttgattgttcttcactgccgtcaggccgacttcaggttgatgtcacactcaacctg
aggaagagtaatgcatcagatgatccccttagcctttcaccgggcacacccccacctctg
ctgaacaattcaactcacagacaaatgatatcaagcccttccacagtgaagctgtcttct
ggtattccaaccgggaaaagaaatcacagaggagagactttacttcatattgcttctatt
aagggtgatataccttctgttgaatacctcttgcaaaatggaaacgacccaaatgttaaa
gaccatgctggatggacaccgttgcatgaagcctgcagtcatgggcacctgaaggtagtg
gagttgctgctccagcacaatgccttggtgaataccactggctatcagaatgactcgcca
ctccacgatgctgccaagaatggccacattgatatcgtcagggtgttactgtcccacggt
gcttccaggaatgctgttaacatatatggtgtgcggccggtggattgtacagacaatgag
aatataagatcattattgctgctgccagagaagaatgaatcattctcaactagccagtgc
tctgtcctgaatgctgggcaacgaaagaatgggccactggtacttataggcagtgggctt
tcctcacaacaacagaacatgctcagcaaactggagacagttcttaaggctaaaaagtgt
gctgagtttgaccatacagtgactcatgtcattgttcctgatgaggaagctcagagtact
ctgaagtgtatgcttgggattctcagtggatgctggatcctgaggtttgcttgggtgaaa
gcctgtctggacagcaaagttcgtgagcaggaagaaaagtatgaagttcatggaggtcca
cagaggagcaggctcaacagagagcagctgttgccaaagctgtttgatgggtgctacttc
tttttggggggaaacttcaagcaccatccaaaggatgacctccttaagctcattgccgca
gcaggaggcagagtcctcagcagaaagcccaagccagacagcgacgtgactcagaccgtc
aacacagttgcataccatgccaggcctgactctgaccagcgcttctgcacgcagtacatc
atctacgaagacctgctgaactgtcacccagagagggttcggcagggcaaagtctggatg
gctccttccacctggcttatcagctgtataatggcctttgaattgcttcctcttgacagc
tga
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