Arvicanthis niloticus (African grass rat): 117706041
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Entry
117706041 CDS
T08817
Symbol
Arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706041 (Arhgef40)
Membrane trafficking [BR:
anu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117706041 (Arhgef40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RHG20_PH
IQ_SEC7_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
117706041
NCBI-ProteinID:
XP_034354746
LinkDB
All DBs
Position
3:complement(66564615..66585407)
Genome browser
AA seq
1641 aa
AA seq
DB search
MKTRETLGVLSWAVLGGGGAGWQQTARGAEARLVAGVGGAVSAGVPGWAGRRRRPSRPSL
AGPRGLGSRASGESRGRCASCPAARLGETERPEGGGGSPAPPAREWDTSRRRAMEPEPVE
DCVQSTLAALYPPFEATAPTLLGQVFQVVERTYQEDALRYTLDFLVPAKHLLAKVQQEAC
AQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPG
GGRVQELPVPSEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELVCPRFV
HKEGLMVGHQPSTLPPELPSGPPGLPSSPLPEEVLGTRSPGDGHNAPAEGPEGEYVELLE
VTLPVRGSPVDAEASGLSRTRTVPARKTTGGKGRHRRHRAWMNQKGLGSRDQDGARPPGE
GSSTGASSDSPSGAEADPDAAVLEAPEPPAEVLGEASESCLLSGEAMGGVGQGAEAPPGT
PRRTGKGNRRKKRAAGRGAVSRGGESTLLTPKDKEETRQQEVLVSLPSPSEQEPAECSLL
KEKEDSGKPESESKEELKPADEKEPAPPENYEPPEERIRETEKEELTSECMAGSTGPEWF
PSEPPTQPLETVQDIKRDSLPEETPPVSVLDDPLVAWDLMASGFFVLTGGVDQTGRALLT
ITPPPPCLPEEPSPSRETLSTALRYLHSLLRPDLQLLGLTILLDLRKAPPLPPALLPALS
QLQDSGEPPLIQRLVILIHEDPPAELCEFQGAELLSEKDLKRVAKPEELQWDLGGHRDLS
PNHWAEIHQEVARLCALCQGVLTSVRQAIEELEGTAEPKEEEAVGMPEPLQKVLADPRLT
ALQRNGGAILMRLRSTHSSKLEGPGPAVLYQEVDEAIHQLVRLSNLRVQQQEQRQRLRQV
QQVLQWLSGPGEEQLASFTVPGNSLSVLQETELRFRAFSTEVQERLVQAREALALEEDIT
SQKVLDIFEQRLEQVESGLHRALRLQRFFQQAHEWVDEGSARLAGAGPGREAVLAALALR
RAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRSHRRRR
ADSASSAGAQHGAHSPSPSLSSLLLPSSPGPRAAPSHCSLTPCGEDYEEESLELAPEADG
RPPRAVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWGIGTPRMERKRSISAQQRL
VSELIACEQEYITTLSEPVPLPGPELTPELRCTWAAALSVRERLRSFHGTHFLQELQGCA
AHPLRIGACFLRHGDQFNLYAQFVKHRHKLESGLAALTTSVKGSMEGSPCLPRALQQPLE
QLARYGQLLEELLREAGPELSSERQALRAAVQLLQEQEARGRDLLAVEAVRGCEIDLKEQ
GQLLHRDPFTVICGRKKCLRHVFLFEDLLLFSKFKGSEGGSETFVYKQAFKTADMGLTEN
IGDSGLCFELWFRRRRAREAYTLQATSPEIKLKWTSSIAQLLWRQAAHNKELRVQQMVSM
GIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVE
EEAWDLDVKQISLASPSASETLDSSGDVSPGPRNSPSLQPPNPGSSTPALTSGGILGLSR
QAWLRGIKSHSRALSDPTTPL
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgggaaacgctgggcgtcctcagctgggcggttctcggagggggcggggcg
ggctggcagcagacagctagaggagcggaggcgaggcttgtggccggggttgggggggcc
gtctcggctggggtcccgggctgggcggggcggcgcaggcggccgtctcggccctccctg
gcggggccccgaggcctgggctcccgagcgagcggggagagccgcggtcgctgtgcgagc
tgtcctgcagctagactcggcgagactgagcgcccagagggaggcggtggctcacccgcc
ccgcccgcccgagagtgggacacctcccgacgccgagccatggagccagaaccagtggag
gactgtgtgcagagcacgcttgctgccttgtacccaccctttgaagccacagccccaacc
ctgttgggacaggtgttccaggtggtggagaggacgtaccaagaggatgcactgaggtac
acgctggacttcctggttcctgctaaacacctgcttgccaaggtccagcaggaagcctgt
gcccagtatagtggattcctcttcttccatgagggctggccactctgcttgcatgagcag
gtggtagtgcagctagcagcccttccctggcagctgctgcgccctggagacttctacctg
caggtggtgccttcagcagcccaagcaccccgtctggcactgaaatgtctggccccagga
ggtgggcgggtacaggagctcccagtgcctagtgaagcctgtgcctacctattcacacct
gagtggctgcaaggcattaacaaggaccggccaacagggcgcctcagcacctgccttctg
tctgcaccctctggaattcagcggctgccctgggctgagctagtctgcccaagatttgtg
cacaaagagggcctcatggtgggacatcagccaagcacattgcctccagaactgccctcg
ggacctccagggcttcctagctctccactccctgaggaggtacttggtacccggagtcct
ggggatggacacaatgctcctgcagaaggtccagagggtgaatatgtggagctgttggag
gtgacactgcctgtgaggggaagccccgtagacgctgaggcctcaggcctctcccggacc
cgtacagtacccgctcgtaagactactggagggaagggccggcaccggagacaccgggca
tggatgaatcagaaaggcctggggtctcgggatcaggatggggcacgcccgcctggtgag
ggaagtagcaccggagcctcttcagactcaccttcaggggctgaggcagacccagatgca
gcagtcctcgaagcgcctgagcccccagcagaggttctgggggaagcctctgaatcctgc
ctcctgtcaggggaggctatgggaggagtgggccagggggctgaagcaccacctggtacc
cctcgaagaaccggcaaaggaaacagaagaaagaagcgagctgcgggcagaggtgctgta
agccggggaggggagagtaccctgctcacccccaaggacaaagaagagactagacagcag
gaagtccttgtcagtctgccctcacccagtgaacaggaacctgcagaatgcagcctgctt
aaggagaaagaggattctgggaagccagagtctgaatcaaaagaggaacttaagccagca
gatgaaaaagagcctgcacccccagaaaactatgagcctccagaagagaggatcagagag
actgagaaagaggagttgacctcagagtgtatggcaggatccacaggtccagagtggttc
ccttctgagccgccaacacagcccctggagactgtgcaggacataaaaagagacagcctc
ccagaagaaactcccccagtttctgttttggatgacccacttgtagcttgggacttgatg
gcctctggattcttcgttctgactggaggggtagatcagactgggagagccctgctgacg
atcacgcctccccctccgtgccttcctgaggagccctcgccttcccgagagacgctgagc
actgctctccgttacctccactcactgcttaggcctgatctgcagttactggggctgacc
atcctccttgaccttcgcaaggcacccccactgcctccagcacttcttcctgccttgagt
cagcttcaggactctggcgagcctccgctcattcagcggctggtgatcctcattcatgaa
gaccctccagctgaactctgtgaatttcagggagctgagttgctgtccgagaaggatcta
aaaagagtggccaagccagaggagctacagtgggacttaggaggacacagggacctttcc
cccaaccactgggcagagatacatcaggaagtggcacggctgtgtgccttgtgccaaggt
gtgctgacctctgtacggcaggccattgaggagctagagggaacagcagaacccaaagaa
gaggaggcggtgggaatgcctgagcccctgcaaaaggtgctggcagatccacggctgacg
gcactacagaggaatggaggagccatcctgatgcgtctgcgctccacccatagcagcaag
ctagagggcccaggcccagctgtgctataccaggaagtagatgaagccattcaccaactt
gtgcgtctatccaacctacgagtgcagcagcaggaacaacgccaacgcctgcgccaagtc
cagcaggtgttgcagtggctgtcgggcccaggagaagagcagctggctagcttcaccgtg
cctgggaactcgctgtcagtcttgcaagagacagaacttcgatttagggcttttagcact
gaggtgcaggagcgcctagtccaagcccgggaagcattggctctggaggaggacatcacc
tcccagaaagttctagatatctttgaacaacggctggagcaggttgagagtggcctccat
cgggccctacggttacagcgcttcttccagcaggcacacgaatgggtagatgagggctct
gctcgtctggcaggagctgggcctggtcgtgaagctgtcctggcagccctagccctgcgg
agggccccagagcccagtgcaggcaccttccaagagatgcgagccctggccctggacttg
ggcagccccgcagcccttcgagagtggggccgatgtcgggcacgctgccaagaactggaa
agaaggattcagcagcagctgggcgaggaggccagtcctagaagccaccggcggcgtcgg
gcagacagtgccagcagcgcaggggcccagcacggagcccatagcccttcacccagcctc
agttccttgctacttcccagcagccctgggccccgggcagccccatcacattgctctctg
accccatgtggggaggactatgaggaagaaagccttgagctagctccagaagcagatgga
agacccccaagagctgtgctgatccgaggactggaggtcaccagtaccgaagtggtagac
aggacatgttcaccccgagaacatgtgctattgggccgggccggagggccagatggaccc
tggggaataggtacccctcgaatggaacgcaaacgaagcatcagtgcccagcagcgtcta
gtgtctgaactgattgcctgtgagcaggaatacataaccactctgagtgagccagtgcca
ctgcctgggcccgagctaactcctgagcttcgatgcacctgggctgcagccctgagtgtc
cgagagaggcttcgcagcttccacgggacacactttctacaagagcttcagggctgcgcc
gcccaccctctgcgcattggggcctgcttcctccgccacggggaccagttcaacctctat
gcacagtttgtgaagcacaggcataaactggagagtggtctggctgcgctcaccacctcg
gtcaagggttccatggagggcagcccttgcttgccccgggctctgcagcagcccctggag
cagctggctcggtatggacagcttctggaggagctcctgagggaagctgggcctgagcta
agctctgaacgccaggccctcagggctgctgtacagttgctccaggaacaagaggcccga
ggcagagatctgctcgccgtagaagctgtgcgaggctgtgagatagatctaaaggaacag
ggacagctcttgcatcgggaccctttcactgtcatctgtggccggaaaaagtgcctccgc
catgtctttctctttgaggacctgctcttgttcagcaagttcaagggttctgaaggagga
tccgagacctttgtttacaagcaggctttcaagaccgctgacatggggctgacggaaaac
atcggggacagtggactgtgtttcgaactatggtttcggcgacggcgtgcacgagaagca
tacactttgcaggctacttcaccagagatcaaactcaagtggacaagttctattgcccag
ctgctgtggagacaggcagcccacaacaaggagctccgagtgcagcagatggtttccatg
ggcattgggaataaacctttcctggatattaaagcccttggagaacggacactgagtgcc
ctgctcactggaagagccgcccgcacccgggcctccgtagccgtgtcatcctttgagcat
gctggcccgtcccttcccggcctctcaccgggagcctgctccctgcctgcccgcgtcgag
gaggaggcctgggatctggacgtcaagcagatttccctggcttccccttcagcctcagaa
acacttgactcttctggagatgtgtccccaggaccaagaaacagccccagcctgcagccc
cccaaccctgggagcagtactcccgctctgaccagtggagggatcttagggctatcccgg
caggcctggctgagaggcatcaagagtcattcccgagccctgagtgaccccaccacacct
ctgtga
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integrated database retrieval system
