Arvicanthis niloticus (African grass rat): 117706073
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Entry
117706073 CDS
T08817
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117706073 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706073 (Spata13)
Membrane trafficking [BR:
anu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117706073 (Spata13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
117706073
NCBI-ProteinID:
XP_034354794
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All DBs
Position
3:complement(58561354..58684645)
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AA seq
1246 aa
AA seq
DB search
MTTAQDGHGQGVTATCSASNPKAPKMVTSSACQNGGCKSSPSSDPEAGEARLSPSKLVRL
FSGSRKRMNSNSERPRSVVLVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREGAEVSK
EEPTGDLGKAAPNGTIATLGKGLGRCTSLGPVGDGAGSDCSDPEDMEDAFQRSTHRSRSI
RRAYGLGRISLLDLGRQPVPEPAVCEIQVRDPEPSRVVPLPRRSKSIDSLSVLKSSFKRK
SASNLTELQGDRQVPPRTLSGFFTDSEKPGGSERRTRRWRSPIRAKDFDRVLRLVSNVKD
AAWKREAPRSAAPSPGPGQGDANPLLGPRSKLHDDYSRRTSSSVEPDSRRGGSLSSPCVP
SPCTTAPYAAPEPHLDVDTAVFPLETKSAQPRGNDGPGASSPSPIPTDPEGLSQASSETH
TAGQHPFDPVQLPTPLRPTTPKPQSPQSPGSTKCPSSLSVLSLSSADSEERTEDAGHRQP
GPVSLQDTVLTTAGDVRGESGDSYLPSNLDGATNPEERKEEVVTEDDWQQGSGLEEEQNE
APRISRRRWGSGRRTRPRPLSDYGQLASRSLSIPEDAIAADPPDEDHTDRMHPASVTTTS
QDPCVPSGCSRGGRRRRPISVIGGVSFYNNTQVEDVENLLVQPAARPPVPAHQVPPYKAV
SARLRPFTFSQSTPIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEELCQA
NPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWW
GRNEDKEAWFPASFVRLRVNQEELPENCSSSHGEEQDEDTSKARHKHPESQQQMRTNVIQ
EIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQ
YNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRLLQQ
MIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKR
KLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQLVSC
KKDLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWNLSMRNAFKLVSKATDEVHLFCARKQ
EDKARWLQAYADERRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAPPHQ
SLPPLHQRHVTVPTSIPQQQVFALAEPKRKPSIFWHTFHKLTPFRK
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccatgggcaaggtgtcacagccacttgttcagcctccaac
ccgaaggcccccaaaatggtgacatcctcagcatgtcagaatggaggctgcaaaagcagc
cccagcagtgatcccgaagccggggaagccaggctcagcccttccaagctggtacgtctc
ttctctggtagccggaagaggatgaattcgaactctgaaaggcctcgctcggtggtcctt
gtggggaattcctccacatggaatgccctggcctccttccgtaaaatgggctcttttaaa
agattgaaatcttctgttcttcaaggaattcagaaccgggagggggcagaagtttccaag
gaagagccaacaggagacctaggaaaggctgctcccaatggcaccattgccaccctggga
aagggcctaggcaggtgtacatccttgggccctgtaggagatggcgctgggtccgactgc
tcagaccctgaggacatggaggacgccttccagaggagcacgcaccgttcgcgcagcatc
cgcagggcctatggcctgggccgcatcagcctgctggacctgggccggcagccagtgcca
gagcccgctgtgtgtgagatccaagtgcgtgacccagagcccagcagggttgtgcctctg
ccgcgcagaagtaagagcatcgacagcttgagcgtcctgaagagctccttcaagcgcaag
tctgcgtccaacctcacggaactgcagggtgacagacaggttccccccaggactctgagt
ggcttcttcacagactccgagaagcccggtggctcagagagaagaaccagacgctggagg
agccccatccgggccaaggacttcgacagagtcctaagactggtgagcaacgtcaaagat
gcggcctggaagagggaggcccccaggagtgcagcccctagccctggtcctggtcagggg
gatgcgaacccactacttgggccacggagcaagctacatgatgactactcacgtcgtacc
agcagcagcgtggagccagattccaggcgtggtggctctttgtcctcaccctgtgtccct
tcaccatgcaccactgcgccctatgcggctccagaaccccacctagatgtggacactgca
gtatttcccctggaaactaaaagtgcccagccacggggaaatgatggacctggtgccagc
agtccctcaccaatccccacagacccagaagggttgagccaagcctccagtgagacacat
actgccggtcagcatccctttgaccccgtgcagcttcccactcctctgaggcccaccaca
cccaagccccaaagccctcagagcccagggagtactaaatgccccagtagtctaagtgtg
ctgtccctcagttcagcggacagtgaagaacggaccgaggatgctgggcacaggcagcca
ggacctgtgtccctccaggatactgtcctcaccactgctggtgacgtgaggggagaaagt
ggtgacagctatcttccctcgaatctcgacggagccaccaatccagaagagaggaaggaa
gaggtggtgactgaggatgactggcagcagggctcaggcctggaggaggagcagaatgag
gcacctcgaatctccaggaggaggtggggctcagggaggcgcacccggccacgaccactg
tctgactacggccagctggccagcagaagcttgtccattcctgaagatgccattgctgca
gaccctccagatgaagaccacacggacagaatgcacccagcaagtgtgaccaccaccagc
caggatccatgtgtcccctcaggctgttccaggggaggccggagaaggcgacctatatct
gtgattggaggggtcagcttctataacaacacccaggtagaggacgtggagaacctcttg
gtccaaccagcagccaggcctcccgtgcctgcacaccaagttccaccctacaaggctgtg
tctgcccgcctccggcccttcaccttctcccagagcactcccatcgggctggaccgcgtg
gggcgtcgacggcagatgaaaacatccaatgtctcttcagatggaggtgcggaatcttcg
gccttagtggatgataatggtagtgaggaagacttcagctatgaggagctctgccaggcc
aaccctcgatacctgcagccaggcggagaacagctggccatcaatgagctcatcagcgat
ggcagcgtggtgtgtgcagaagcactttgggaccatgtgaccatggacgaccaggaactg
ggcttcaaggctggggatgtcatccaggtcctggaagcctctaacaaggactggtggtgg
ggccggaatgaagacaaagaggcctggttccctgcaagctttgttaggcttcgagtcaat
caggaggagctaccggagaactgcagcagctcccatggggaggagcaggacgaggacacc
agcaaagctcgccacaagcacccagagagccagcagcagatgcggaccaatgtcatccag
gagatcatgaacaccgagcgcgtgtatatcaagcacctcaaggacatctgcgagggctat
atccgacagtgtcgtaagcacacgggaatgttcactgttgcgcagctagccactattttt
ggaaacattgaagacatttacaaattccaaagaaagtttctgaaagaccttgagaaacag
tacaacaaagaggaacctcacttgagtgaaataggatcctgctttcttcagcaccaagag
ggctttgccatctactctgagtactgcaacaaccaccccggcgcctgtgtggagctgtcc
aacctcatgaagcacagcaagtaccggcacttcttcgaggcctgccgcctgctccagcag
atgatcgacatcgccctggatggcttcctcctcacgcctgtgcagaagatctgcaaatac
ccactgcagctggctgagctgctcaagtacaccacacaggagcacagtgattacaataat
ataaaggcagcctatgaagccatgaagaacgtggcctgcttgatcaatgaacgcaagcgg
aagctggagagcatcgacaagatcgcccgctggcaggtgtccatcgtaggctgggagggc
ctggacattctagaccgaagctctgagctgattcattctggagagctaaccaaaatcacc
aggcagggcaagagccagcagcgaatcttcttccttttcgaccaccagctggtgtcctgc
aagaaggacctgctgcgcagggacatgctgtactacaagggccgcatggacatggatgag
gtggagcttgtggatgtggaggacgggcgggacaaagactggaacctcagcatgcggaat
gccttcaagctggtcagcaaagccaccgatgaggttcatctgttctgtgctagaaagcaa
gaagacaaggccaggtggctgcaggcctatgcggatgagaggcggcgggtgcaggaggac
cagcagatgggaatggaaatcccagaaaatcagaagaaactcgccatgttgaatgctcag
aaggcaggacatgggaaatctaaaggctacaacagctgccccgtggccccgccccaccag
agcctgccgcctcttcaccagcgccacgtcaccgtacccaccagcatcccgcagcagcag
gtctttgccttggctgagcccaagaggaagccatcgatattctggcacaccttccacaaa
ctcacccccttccggaaatga
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