Arvicanthis niloticus (African grass rat): 117706085
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Entry
117706085 CDS
T08817
Symbol
Lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706085 (Lgi3)
Membrane trafficking [BR:
anu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117706085 (Lgi3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
FG-GAP_3
LRRCT
stn_TNFRSF12A
LRR_1
LRR_14
Motif
Other DBs
NCBI-GeneID:
117706085
NCBI-ProteinID:
XP_034354808
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All DBs
Position
3:complement(49252274..49259981)
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AA seq
548 aa
AA seq
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MAGLRARRGPGRGLLVLSTLGFCLMLQATAKRPPKTPPCPPSCSCTRDTAFCVDSKSVPK
NLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE
NNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILSDLDLRGNALNCDCKVKW
LVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLSFPAVSAEPFL
YSSDLYLALAQPGASACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDGQLYVVVAQLF
GGSYIYHWDPNTTRFTKLQDIDPQRVRKPNDLEAFRIDGDWFFAVADSSKAGATSLYRWH
QNGFYSHQALHAWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVAQGEVTQV
PDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGHRY
LALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYR
HVVVDLSA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctacgagccaggcggggccctgggcgcgggctactggtgttgtccacgctg
ggtttttgcctaatgctgcaagccactgccaagaggcctcctaagacacccccctgccca
cccagctgctcctgcaccagggacaccgccttctgcgtggactctaagtcggtgcccaag
aacctgccttcagaggtcatctccctgacgctggtgaacgctgccttctcagagatccag
gatggagccttctcccacttgccactgttgcagttcttgttactcaactccaacaagttc
acgctgattggagacaatgccttcacaggactgtcgcacctgcagtacctcttcatagag
aacaacgacatctgggccctctccaagtttaccttcagaggactgaagtccttgacacac
ctctctctggccaacaataacctgcagacactgcccagagacatctttcgtcccctggac
atcctgagtgacttggacctccggggcaacgcccttaactgtgattgcaaggtaaagtgg
ctggtggagtggctggcacacaccaacaccacggtggctcccatctactgcgccagcccg
ccccgcttccaggagcacaaggtgcaggacttgcctcttcgggaattcgactgtatcacc
accgattttgtcctctaccagactctgtccttcccagcagtgtcagcggaacccttcctt
tactccagtgacctctatttggctctggcccagccaggtgccagcgcctgcaccatcctc
aagtgggattatgtggaaagacagcttcgagactacgacagaattccagccccttcagct
gtgcactgcaagccaatggtggtggatggccagctctatgtagttgtggcccagctgttt
ggtggctcatacatttaccactgggaccccaacaccacacgtttcaccaagctgcaggat
atcgacccacagcgcgtgcgcaagcccaatgacctggaagccttccgcatcgacggcgat
tggttctttgcagtggctgacagctccaaggcaggtgccaccagcctctaccgttggcat
cagaatggcttctattcccaccaggccctgcacgcctggcaccgcgacaccgacctggag
tttgtggatggtgagggcaagccacggttgattgtgtctagcagctctcaggcgccagtc
atttatcaatggagtcgtactcagaaacagtttgtggcccagggagaggtgactcaggta
cctgatgcccaggctgtgaaacactttcgtgctggccgagacagctacctgtgccttagc
cgctacattggcgactccaagatcctgcgctgggagggaacccgtttctctgaggtgcaa
gcccttccttcccgaggttcgctggccctacagcccttcctggtgggtggtcaccgctac
ctggcactgggcagtgacttctccttcacccagatctaccagtgggatgaagggcgacag
aaatttgtacggttccaagagctggctgtacaggccccccgggccttctgctacatgcct
gcaggagatgctcagctgctcctggcccccagtttcaagggacaaacgctggtgtaccga
catgttgtggtggaccttagtgcctag
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