Arvicanthis niloticus (African grass rat): 117706162
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Entry
117706162 CDS
T08817
Symbol
Carmil3
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706162 (Carmil3)
Membrane trafficking [BR:
anu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117706162 (Carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF7605
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
117706162
NCBI-ProteinID:
XP_034354914
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All DBs
Position
3:complement(63763755..63781345)
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AA seq
1374 aa
AA seq
DB search
MAKASVELTRELQDSIRRCLSQGAVLQQHRVKLETKPKKFEDRVLALTSWRLHLFPLKVP
AKVESSFNVLEIRAFNTLSQNQILVETERGMVSMRLPSAESVEQVTRHVSSALSKVCPGP
GCLIRRGNADTPEGPRDTSPNSETSTSTTHSVCGGFSETYAALCDYNGLHCREEVQWDVD
TIYHAEDNREFNLLDFSHLESRDLALMVAALAYNQWFTKLYCKDLRLGSEVLEQVLHTLS
KSGSLEELVLDNAGLKTDFVQKLAGVFGENGSCVLHALTLSHNPIEDKGFLSLSQQLLCF
PTGLTKLCLAKTAISPRGLQALGQTFGANPAFASSLRYLDLSKNPGLLATDEANALYSFL
AQPNALVHLDLSGTDCAVDMLLGALLHGCCSHLTYLNLARNSCSHRKGREAPPAFKQFFS
SAYTLSHVNLSATRLPLEALRALLQGLSLNSHLSDLHVDLSSCELRSAGAQALQEQLGAV
TCIGSLDLSDNGFDSDLLTLVPALGKNKSLKHLFLGKNFNVKAKTLEEILHKLVQLIQEE
DCSLQSLSVADSRLKLRTSILINALGSNTCLAKVDLSGNGMEDIGAKMLSKALQINSSLR
TILWDRNNTSALGFLDIARALESNHTLRFMSFPVSDISQAYRSAPERTEDVWQKIQWCLV
RNNHSQTCPQEQAFRLQQGLVTSSAEQMLQRLCGRVQEEVRALRLCPLEPVQDELIYARD
LIKDAKNSRALFPSLYELGHVLASDGPVRQRLESVASEVSKAVDKELQVILESMVSLTQE
LCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNS
IVDEILQELYHSHKSLARHLTQLRTLSDPPGGANQGQDPSSRGRGRNHDHEETDDELGTN
IDTMAIKKQKRCRKIRPVSAFISGSPQDMESQLGSLGIPPGWFSGLGGSQPTASGSWEGL
SELPTHGYKLRHQTQGRPRPPRTTPPGPGRPSQVPVPGPRQENGMATRLDEGLEDFFSRR
VMDESSSYPRTLRTMRPGLSEPPLPPLQKKRRRGLFHFRRPRSFKGDRGPGSPTAGLLLP
PPPPPPPTQESPPSPDPPSLGNNSSPCWSPEEESSLLPGFGGARGSSFCRKMGTERLEAG
EGAPAPGTAQQPRVHGVALPGLGRTKGWSFDGKREGTDPDQEDSTQAWQKRRSSDDAGPG
AWKPPPPPQSSKPSFSAMRRAEATWHIAEESAPNHSCQSPSPASQDGEEEKEGALFPERM
VPARNAKDPPIGPRPPKPVAVPRGRRAPQVPGDREEAESSGAIPGASKPRLRLGSQQDQE
EPEGQGPSDLGRRTAPLKPKRTRRAQSCDKLEPDRRRPPDPTGVCAGTSEPGTD
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccagcgtggagctcacccgcgagctgcaagacagcatccggaggtgcctg
agccaaggggctgtgctccagcagcatcgtgtgaaactggagacaaaacccaagaagttt
gaggaccgagtgctggccctgacttcctggcgtctccatctttttccccttaaagtccca
gccaaggtggaaagctcattcaatgtcctggagatccgtgccttcaacacactcagtcag
aaccagatcctggtggagactgagcgtggcatggtgagcatgcggctgccatcagctgag
agtgtggagcaggtgacacggcatgtgagctctgccctctccaaggtctgccctggccct
gggtgtttgatccggcgtggaaatgcagacaccccagaggggccccgagacacatcaccc
aactctgaaacttccacatctaccactcacagtgtgtgtggtggcttctctgaaacctat
gctgccctatgtgactacaatggactccactgccgagaggaggtgcaatgggatgtggac
accatctaccatgcggaggataaccgagagttcaatcttttggatttcagccacttggag
agccgagatttggcccttatggtggctgccctggcctacaaccagtggtttaccaaactc
tactgcaaagacttgagactgggctcagaagtgctagaacaggtgctacataccctcagc
aagtcggggagcctcgaagagctggtgctggacaatgctgggcttaagacggactttgtc
cagaagctggccggggtatttggggagaacgggagctgtgtgctgcatgcgctcactctg
tcccacaaccccatcgaggacaagggttttctcagcctgagccagcagcttctctgcttc
cctaccggcctcaccaaactgtgcctggccaagactgccatttcccctcgagggctccag
gcactgggccagaccttcggggccaacccggcctttgccagctcccttcgatacctggac
ctgagcaagaacccagggctgcttgccacagacgaggccaatgccctctatagttttctg
gcccaacccaatgccctggtacacctggacctttcagggacggactgtgctgtcgacatg
ctcctgggcgccctacttcacggctgctgttcccaccttacctacctcaacctggctcga
aacagctgctcccacaggaagggccgggaggccccaccagccttcaagcagttcttcagc
agcgcctacaccctgagccatgtcaacctgtcagccacaaggctgcccctggaggccctc
agggcacttcttcagggcctctccctcaacagtcacctcagtgatctgcacgtggacctt
agcagctgtgagctccgctcagcaggagcccaggccttgcaggagcagctgggggctgtc
acctgtataggcagcctagatctgtctgataacgggtttgactcagacctcctgacgctg
gtgcctgcacttggcaagaacaagtccctcaagcacctattcctaggaaagaacttcaac
gtcaaggccaagactttggaagaaatccttcataagctggtgcagttgatccaggaagag
gactgttccctgcagtcactatctgtggcggactccaggctgaagcttcgcaccagtatc
ctcatcaacgccctgggcagcaacacctgcctggccaaggtggatctgagcggcaacggc
atggaggacatcggggccaagatgctatcgaaggcactgcagataaattcttccctcaga
actatcctatgggatcggaacaatacgtccgccctgggcttcctggatattgcaagggcc
ctggagagcaatcacaccttgcgcttcatgtccttccctgtgagtgacatctctcaagct
taccgcagcgcccctgagcgcacagaggatgtgtggcagaagattcagtggtgcctggtg
aggaacaaccactcccagacatgccctcaggagcaagccttcaggctgcagcagggcctg
gtgaccagcagcgccgagcaaatgctgcagaggctgtgtgggcgagtgcaggaggaggtg
cgggccctgagactatgtcccctggagcctgtgcaagacgagctgatttatgcccgagac
ctcatcaaggacgccaagaactcccgggcgctgtttcccagcctctatgagctgggccac
gtgttggccagtgacgggcctgtgcggcaaagactagagtcggtagccagtgaggtatcc
aaagctgtggacaaggagcttcaggtgattctggagtccatggtcagcctaacacaggaa
ttgtgccctgtggccatgcgggtggcagaagggcacaacaagatgttgagcaacgtggca
gaacgtgtcactgtgccccggaacttcatccgtggagcgctgctggagcaggcgggacag
gacattcagaacaagctggacgaggtgaagctctccgttgtcacctacttgaccaactcc
atagtggatgagatcctgcaggagctgtaccactcccacaagagcctggcccggcacctg
acccagctgaggacactgtcagatccaccaggaggggcaaaccaagggcaggatccttct
tcccgaggcagaggcaggaaccatgaccacgaggaaacggatgacgagcttgggaccaac
atcgacaccatggccatcaaaaagcagaaacgctgccggaagatccggccagtgtctgcc
tttatcagtgggagccctcaggacatggaaagccaactgggaagcttggggatccctcct
ggctggttctcaggacttggaggcagccagcccacagcaagtggctcctgggaaggccta
tctgagctacctactcatggctataaactaaggcatcaaacacaagggaggcctcggcct
cccaggaccaccccgccaggacctggtcggcccagtcaggtgccagtgcctgggcctcgt
caggagaatgggatggccacccgtctagacgaggggctggaggacttcttcagcagaagg
gtcatggacgaaagttccagctacccccggactctgaggaccatgcggccaggcctctca
gagccaccactgcctccactccagaagaagaggcggcgaggcctgtttcacttccgacgg
ccccggagcttcaagggggacaggggaccagggtcccccactgctggactcctccttcct
ccacccccacctccacccccaactcaggagagccctcccagcccagatcccccaagcctt
ggcaataactcatctccttgttggagcccagaagaggagagcagcctccttcctggattt
ggaggagcccggggatcttccttctgcaggaagatgggcacagagaggttggaggcagga
gaaggagccccagcccctgggacagcgcagcaaccaagggtgcatggtgtagcccttcct
ggcttgggaagaaccaaaggttggagctttgatggaaaacgagagggcacagacccagac
caggaggacagtacccaggcttggcagaaacggcgctcttcggacgatgcagggcctgga
gcctggaagccaccaccacccccacaaagctccaagccaagcttcagcgccatgcgccga
gcagaggccacatggcacatagctgaggagagcgcccccaaccacagctgccaaagcccg
agcccagcttcccaggatggagaggaggaaaaggagggagccttatttccagagagaatg
gtccccgctaggaatgccaaggacccccccataggtccacgtccccctaagccagtggct
gtgcccaggggccgcagggccccccaggttccaggagacagggaagaggctgagagcagc
ggtgctatcccaggagccagcaagccccggctgagactgggctcacagcaagaccaagag
gagccagaaggacaaggaccctctgatctgggccgccgaacagcccccctgaaacccaag
agaacacggcgagcacagtcctgtgacaaactggaacctgatagaagacggccacctgac
cctacaggtgtctgtgcaggaaccagtgaaccaggaacagactga
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