KEGG   Arvicanthis niloticus (African grass rat): 117706222
Entry
117706222         CDS       T08817                                 
Symbol
Sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03013  Nucleocytoplasmic transport
anu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117706222 (Sap18)
   03015 mRNA surveillance pathway
    117706222 (Sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anu03019]
    117706222 (Sap18)
   03036 Chromosome and associated proteins [BR:anu03036]
    117706222 (Sap18)
Messenger RNA biogenesis [BR:anu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117706222 (Sap18)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     117706222 (Sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 117706222
NCBI-ProteinID: XP_034355001
LinkDB
Position
3:complement(61283829..61288060)
AA seq 172 aa
MLAAGVGGQGERLPGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH
RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGY
RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPSSGRMRPY
NT seq 519 nt   +upstreamnt  +downstreamnt
atgctcgctgcaggggtcggaggtcagggcgagcgtctcccgggccgaaggaggaagatg
gcggtggaatcgcgcgttacacaggaggaaattaagaaggagccggagaagccgatcgac
cgcgagaagacctgcccgctcctgctgcgggtcttcaccaccaacaacggccgccaccac
cgaatggacgagttctcccgcgggaacgtgccttcgagcgagctgcagatctatacctgg
atggatgcaaccttgaaagaactgactagtttagtaaaggaagtctacccagaagccaga
aagaagggcacgcacttcaattttgcaattgtgtttatggatcttaaaagacctggatat
cgagttaaggagatcggcagcaccatgtctggcaggaagggcactgatgactccatgacc
ctgcagtcgcagaagttccaaataggggattatctggacatagccatcacgcctccaaac
cgggcaccgccttcgtcagggaggatgagaccatactga

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