Arvicanthis niloticus (African grass rat): 117706249
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Entry
117706249 CDS
T08817
Symbol
Sox21
Name
(RefSeq) transcription factor SOX-21 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117706249 (Sox21)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117706249 (Sox21)
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Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117706249
NCBI-ProteinID:
XP_034355032
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Position
3:6069870..6073656
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSVADAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcgtcccatgaacgccttcatggtgtggtcgcgg
gctcagcggcgtaagatggcccaggagaaccctaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctcaccgagtctgagaagcggccgttcatcgacgag
gcgaagcgcctgcgagccatgcacatgaaggagcatcccgactacaagtaccggccgcgg
cgcaagcccaagacgctgcttaaaaaggacaagttcgccttcccggtgccctacggcctg
ggcagcgtggcggacgccgagcacccggcgctcaaggcgggagccgggctgcacgcgggc
gcgggcggcggcctggtacccgagtctctgctcgcgaaccccgagaaggcggccgccgcc
gctgccgccgccgccgcgcgcgtcttcttcccgcagtctgcggccgccgccgctgccgcc
gctgccgccgccgcggcgggcagcccctactccctgctcgacctgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctgccgtacgcatcgtcgctggggtaccccacggcg
ggtgcgggcgccttccacggggcggcagcggcggctgcagcggccgcggcggccgccggg
gggcacacgcattcccaccccagcccgggcaaccccggctacatgatcccgtgcaactgc
agcgcgtggcccagcccggggctgcagccgccgctcgcctacatcctgctgccaggcatg
ggcaagcctcagctggacccctaccccgctgcctacgcggccgcgctatga
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