Arvicanthis niloticus (African grass rat): 117706455
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Entry
117706455 CDS
T08817
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
117706455 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117706455 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
anu03310
]
117706455 (Rorb)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117706455 (Rorb)
Nuclear receptors [BR:
anu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117706455 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117706455
NCBI-ProteinID:
XP_034355224
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Position
1:complement(126863973..127046909)
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AA seq
470 aa
AA seq
DB search
MCENQLKTKADGTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLSNLNTETGSTYANGHVIDLPKSEGYYNIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaactaaagctgacggcactgcacaaattgaagtgatacca
tgcaaaatttgtggtgataaatcctccgggatccactacggagtcatcacgtgtgaaggc
tgcaagggattcttcaggaggagccagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacaggaaccgttgccaacactgccgcctgcagaag
tgtcttgccctaggaatgtcaagagatgctgtaaagttcgggaggatgtccaagaagcag
cgggacagcctgtacgctgaggtgcagaagcatcagcagaggctgcaggagcagcggcag
cagcagagcggggaggcagaggccctcgccagggtgtacagcagcagcattagcaacggc
ctcagtaacctgaacaccgagaccggcagcacatacgccaacgggcacgtcattgacctg
cccaagtccgaaggttattacaacatagattccggtcagccgtctcccgatcagtcagga
ctggacatgactggaatcaaacagataaagcaagaacctatctatgacctcacatccgta
cccaacttgtttacctatagctctttcaacaacgggcagttagctcccgggataacaatg
tctgagatcgatcgaattgcacagaacatcattaagtcccatttggagacatgtcagtac
acaatggaagagctacatcagttggcatggcagacccacacctacgaggaaataaaggca
tatcaaagcaagtccagggaggctctgtggcagcaatgtgccatccagatcacccacgcc
atccagtacgtggtggagttcgcaaagcggataacaggcttcatggagctgtgtcagaac
gatcagatcttacttctgaagtcaggttgcttggaagtggttttagtgagaatgtgccgt
gccttcaatccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttctgatgacctagtgaatgaagcatttgactttgcaaagaatctg
tgttccttgcagctgactgaggaggagattgctctgttctcctctgctgttctgatatcc
ccagaccgagcctggctgatagaaccaagaaaagtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcacctggatgatgagaccctggcaaagtta
atagccaagataccaactatcacagcagtctgcaacttgcatggggagaagctgcaggta
tttaagcagtctcatccagacatagtgaatacactgtttcctccactgtacaaggagctc
tttaatcctgactgtgctgcggtctgcaaatga
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