Arvicanthis niloticus (African grass rat): 117706481
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Entry
117706481 CDS
T08817
Symbol
Tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117706481 (Tial1)
03041 Spliceosome [BR:
anu03041
]
117706481 (Tial1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117706481 (Tial1)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117706481 (Tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
117706481
NCBI-ProteinID:
XP_034355226
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All DBs
Position
1:complement(95524263..95545796)
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AA seq
392 aa
AA seq
DB search
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQ
HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ
TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
NFQQVDYSQWGQWSQVYGSPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMG
GFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacgacggacagccccggactctatatgtaggtaacctctccagagatgtg
acagaagtccttattcttcagttattcagtcagattggaccctgtaaaagctgtaaaatg
ataacagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcag
catacaagcaatgacccatattgctttgtggaattttatgaacacagagatgcagctgct
gcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggca
acaacaccaagtagccagaaaaaagatacttccaatcacttccatgtctttgtgggggat
ttgagtccagaaattacaacagaagatatcaaatcagcatttgccccctttggtaaaata
tcggatgcccgggtagttaaagatatggcaactggaaagtccaaaggctatggctttgta
tctttttataacaaactggatgcagagaatgcaattgtgcatatggggggtcagtggttg
ggaggtcgacaaatcagaaccaattgggccacacgcaaaccacctgctcctaaaagtaca
caagagactaacactaagcagttgagatttgaagatgtagtaaaccagtcaagtccaaaa
aactgtactgtgtactgtggagggatcgcttcgggcctgacagatcaacttatgagacaa
acattttcaccatttggacaaattatggaaataagagtttttccagagaagggctattcg
tttgtcagattttcaactcatgaaagtgcagcccatgccattgtttctgtgaacggtact
acaatcgaaggacatgtggttaaatgctattggggtaaagaatctcctgatatgactaaa
aacttccaacaggttgactacagtcagtggggccagtggagccaagtgtatggcagtcca
caacagtacggacagtatatggcaaacgggtggcaagtacctccctatggagtatatggg
cagccttggaaccagcaaggatttggagtagatcaatcaccttctgctgcttggatgggt
ggatttggtgctcagcctcctcaaggacaagcccctccccctgtaatacctcctccaaac
caagctgggtatggaatggcaagtttcccaacacagtga
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