Arvicanthis niloticus (African grass rat): 117706643
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Entry
117706643 CDS
T08817
Symbol
Sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117706643 (Sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706643 (Sec24d)
Membrane trafficking [BR:
anu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117706643 (Sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
117706643
NCBI-ProteinID:
XP_034355456
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All DBs
Position
4:100877393..100974600
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AA seq
1034 aa
AA seq
DB search
MSQQGYVATPPYSQSQPGMGISPPHYGHYGDPSHVSSPPGMMKPSGPSGATAPSGLLPPG
PLPPGPPQFGPNGAHGPGHPPQRFPGLPPVNNVAPSYASGQPLPQSSYPGPGSTSSVTQL
GSQFSSMQINSYGTGMTPQSQGPPGPQAAGAFQGPPQPARPSILQPGPQVPPPPPTALNG
PGASPMSPPTHRQDGLPAPAPLNSQYQPPPPPGQTLGAGYPPQPATNYGPQMGGAQLSYP
GGFPGGPAQMAGPAPQLQRKLDPDSIPSPIQVIENDRATRGGQVYTTNTRGQVPPLVTTE
CVIQDQGHSSPRYIRCTTYCFPCTSDMAKQAQIPLAAVIKPFADIPPNETPLYLVNHGES
GPVRCNRCKAYMCPFMQFIEGGRRYQCGFCSCVNDVPPFYFQHLDHIGRRLDHYEKPELS
LGSYEYVATLDYCRKNKPPNPPAFIFMIDVSYSNIKSGLVRLICEELKSVLKRLPKEEHE
ETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYEESQSVIHN
LLDQIPEMFADSNENETVFAPVIQAGMEALKAAECPGKLFIFHSSLPTAEAPGKLKNRDD
KKLVNTDKEKILFQPQTAVYESLAKDCVANSCSVTLFLFPSQFVDVASLGLVPLLTGGTL
YKYNVFQIQLDSQRFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGIFMNNTTDVEM
AAIDCDKAVTVEFKHDDKLSEDVGALIQCAVLYTTISGQRRLRIHNLALNCSTQLADLYK
NCETDALINFFAKSAFKAVLNQPLKTIREILVNQTAHMLACYRKHCASPSAASQLILPDS
MKVLPVYINSLLKNCVLLSRPEISPDERAYQRQLVMTMGVADSQLFFYPLLLPIHTLDVK
SAALPPAVRCSESRLSEEGIFLLANGLNMFLWFGVGSPPELIQGIFNVPSFAHINTDMPS
LPEVGSPHSEQLRMIMNKIQQKKPYSMKLIIVKQREQREMAFRQFLVEDKGLYGGSSYVD
FLCCVHKEICQLLN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgtggcgacacccccctattctcagtcccagcctggaatgggc
atttctcccccccactacgggcactatggggatccatcccatgtatcctctccgccaggc
atgatgaagccatcggggccttcgggagccactgctccttcggggctgctgcccccaggc
cctttacctcctggaccccctcagtttggccccaatggagcccatggcccaggccatcct
cctcaaagatttccaggactcccgcctgtcaataatgtggcaccctcttatgcatcaggc
cagcccctgccacagtcatcttacccaggtcctgggtccacttcctctgtcacccagctg
ggcagtcagttcagctccatgcagatcaacagctatggtaccggcatgactccccagagc
cagggtccgcctggcccccaggcagcaggcgccttccagggcccaccacaacctgcacgg
ccatctattctgcagccagggcctcaggttccaccaccaccccccaccgccctgaacggc
cctggtgcctcgcctatgtctccaccaactcacaggcaagatggactccctgcgccggct
cctctgaattcacaatatcagcccccacctccaccaggccagaccctgggtgctggctac
cctccacagccagcaaccaactatggaccgcagatgggaggtgcacagctgtcttaccca
ggaggcttccctggagggcctgcacagatggctgggccagcacctcagctccagaggaag
ctggatccggactccatccccagccctattcaagtgatcgagaatgacagggccaccaga
ggtggacaagtctatacgaccaacaccaggggccaggtgcctcctctggtcaccaccgag
tgtgtgattcaagaccaaggccactccagtccccggtacatccgctgcaccacgtactgc
tttccgtgtacgtcagacatggctaagcaagctcagatcccgctggctgccgtcatcaaa
ccctttgctgacattccaccaaatgagacccccttgtacttggtaaaccatggggagagc
ggaccagtgaggtgcaacaggtgcaaagcctacatgtgcccattcatgcagttcatcgaa
ggcggacggcgctatcagtgcggattttgcagttgtgtgaatgatgtcccaccattctat
ttccaacatctggaccacattgggaggaggctggaccactacgagaagccagagctgtcg
ctcggatcctatgaatatgttgctacgttggattactgcagaaagaataaacctcccaac
ccaccagccttcatcttcatgattgatgtctcatacagtaacataaagagcggactcgtc
aggctcatatgtgaagaactcaagagcgtgctgaagaggctgcccaaggaggagcatgag
gagacgtctgcaattcgagttggcttcatcacatacaacaaagttctccatttctttaat
gtgaagagtaatctggcccaacctcagatgatggtggtgacggatgtcggagaggtcttt
gttcctttgttggatggattccttgtcaactatgaagaatcccaatctgtgatccataat
ttattggaccagattcctgagatgtttgctgactctaatgaaaacgagacagtctttgca
cctgtcatccaggccggtatggaggccctgaaggcagcagagtgccctgggaagctgttc
atcttccattcctccttgcctactgccgaagcaccggggaagctcaagaacagagacgac
aaaaagctggttaacacggacaaagagaagatacttttccagccccaaacagctgtctac
gaatctctggccaaggactgtgtggccaacagctgctcggtgactctgttcctctttccc
agtcagtttgtggatgtggcttccttgggtctggttcccctgctcacgggaggaacgctt
tacaaatacaacgtttttcagatacagttggatagccaaaggtttttgaatgacctccgg
aatgatattgagaagaaaataggctttgatgccattatgagggttcgaaccagcacaggt
ttcagggccactgatttctttggtggaatattcatgaacaacaccacggatgtggaaatg
gcggccatcgactgtgataaggccgtgacggtagagttcaagcatgatgacaagctcagt
gaagatgtcggggccctgatccagtgcgctgtgctctacacgaccatcagtggtcagcga
agactccggattcacaatctcgccttaaactgcagcacccagctagcggatctgtacaag
aactgtgaaacggatgccctcatcaacttctttgccaagtcagcttttaaagcagttttg
aaccagcctttgaagaccatccgggaaattttagttaatcagactgcccatatgttggca
tgttaccggaagcactgtgccagtccgtctgcagcaagccagctcatcctgccagactcc
atgaaagtgctgcctgtgtacataaatagtttgttgaaaaactgtgtgctgctcagcaga
ccagagatctcccctgatgagcgggcgtaccaacggcagctggtcatgaccatgggcgtg
gctgactcccagctcttcttctacccactgctcctgccaattcacacgttagatgtgaag
agcgcagcgctgccaccggccgtccgctgctccgagtcccggctctccgaagaaggaata
ttcctgctggctaatgggctgaacatgttcttatggtttggagtgggcagcccaccagag
ctgattcaggggatatttaatgtgccgtcgtttgcacatatcaacacagatatgccgtcg
ctgcctgaggtgggaagtccacactctgaacaactcagaatgataatgaataaaattcag
caaaagaagccgtactcaatgaagctcatcatagtgaaacagcgagagcagcgggagatg
gctttccgacagttcctggtggaagataaaggcctctatggaggatcatcttatgtggat
ttcctctgctgtgttcacaaggagatctgtcagctgctgaactga
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