Arvicanthis niloticus (African grass rat): 117706684
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Entry
117706684 CDS
T08817
Symbol
Exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117706684 (Exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117706684 (Exosc8)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117706684 (Exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117706684
NCBI-ProteinID:
XP_034355596
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All DBs
Position
4:complement(38157847..38164494)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVIENSQIIK
KEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEEEHLSTGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSMKHK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggttcaaaactgtggaaccgctggagtattacaggagatttctgaaagaa
aactgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacataggt
tccatcagtacggcggatggctctgctctagtcaagctgggaaacaccacagtcatttgt
ggagttaaggcagaatttgcagcaccaccagtagatgcccctgaccgaggatatgtcgtc
cccaatgtggatctaccaccgctgtgttcatcgaggtttcggactggaccccctggggaa
gaggctcaagtaaccagccagttcattgctgatgtcattgagaactcacagataattaag
aaagaggacttatgcatctctccaggcaagctggcttgggttctatactgtgacctcatt
tgtctagactacgatgggaacatcttggacgcctgcacgtttgctttgctagcagcttta
aagaatgtacagttgcctgaagtcactataaacgaagagactgctttagcagaagtcaat
ttaaagaagaaaagttatttgaatgttagaacaaacccagttgctacttcctttgctgta
tttgatgacactttactgatagttgatcctactggagaggaggaacacctgtcaacagga
accttaacagtagtgatggacgaggaaggcaagctgtgctgtcttcacaagccaggtggg
agtgggctgactggagctaaacttcaggactgcatgagtcgagcagtgaccagacacaaa
gaagtgagcaagctactggatgaagtaattcagagcatgaaacacaaatga
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