Arvicanthis niloticus (African grass rat): 117706696
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Entry
117706696 CDS
T08817
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706696 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117706696 (Snx27)
Membrane trafficking [BR:
anu04131
]
Protein recycling
Others
Others
117706696 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117706696 (Snx27)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
PDZ_2
SNX17_FERM_C
RA_3
SNX17-31_F2_FERM
UBX
RBD
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
117706696
NCBI-ProteinID:
XP_034355627
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All DBs
Position
4:complement(74071734..74150765)
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AA seq
539 aa
AA seq
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MADEDGEGIHPSAPHRNGGGGGGSGLHCSGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTAVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLF
TTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcacccctcagccccgcaccggaatggaggcggc
ggcggggggtctgggctccactgctccgggaacggtggcgggggaggcggcggcccgcgg
gtcgtgcgcattgtcaagtccgaatccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagatcccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaagtttgtggta
tacaatgtttacatggccgggagacagctgtgctctaagcggtaccgggagtttgccata
ctgcaccaaaacctgaagagagagtttgccaactttacatttcctcgacttccaggaaaa
tggccattctcattatcagaacaacagttagatgcccggcgtcgggggttggaagaatat
ctagaaaaagtgtgttcaattcgagtcattggtgagagcgacatcatgcaggaattcctg
tctgaatctgatgagaattacaatggtgtgtcggatgtagagctgagagtagcattgcct
gatggaacagctgtcactgtcagagttaaaaagaacagtactacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaattactttgccttatttgaa
gtgatcaatcattcctttgtacgtaagctggcacctaatgaatttcctcataaactctac
gtccagaattatacatcagctgtgccaggcacctgcctgaccattcgcaagtggctcttt
acaacagaagaagaagtcctcttaaatgacaatgaccttgctgttacatacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcagaagagaagtcttaccagtta
cagaagctatatgaacaaaggaagatggtcatgtacctcaacatgctaaggacctgtgag
ggctacaatgaaatcatcttccctcactgtgcctgtgactccaggaggaaggggcatgtg
atcacagccatcagcatcacgcactttaaacttcatgcctgcactgaagaagggcagctg
gagaaccaggtaatagcgtttgaatgggatgagatgcagcgatgggacacagacgaagaa
ggaatggccttctgttttgagtatgcgcgaggagagaagaagcctcgatgggttaaaatc
ttcacgccatatttcaattacatgcatgaatgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacagcagagggatgtggccacctag
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