Arvicanthis niloticus (African grass rat): 117706707
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Entry
117706707 CDS
T08817
Symbol
Ssx2ip
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04517
IgSF CAM signaling
anu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117706707 (Ssx2ip)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117706707 (Ssx2ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117706707 (Ssx2ip)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117706707 (Ssx2ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
117706707
NCBI-ProteinID:
XP_034355663
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Position
4:122437558..122476845
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AA seq
615 aa
AA seq
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MGDWMTVTDPVLCTENKNLSQYTSETKMSPSSLYSQQVLCSSIPLSKAVHGDFSAFCTGE
NIEQSISYLDQELTTFGFPSLYEESKSKETKRELNIVAVLNCMSELLVRQRKSLLAQESA
ETQNLKLGSDMDHLQSCYAKLKEQLETSRREMISLQERDRQLQCKNRNLHQLLKNEKDEV
QKLQNIIASRATQYNHDVKRKEREYNKLKERLHQLVMNKKDKNIAMDVLNYVGRADGKRG
SWRTDKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPR
ERAEDGTGTVVISDIEEDAGELSRDSVWGLSCDTVREQLTNSIRKQWRILKSHVEKLDNQ
ASKVHSEGLNEEDVISRQDHEQETEKLELEIERCKEMIQAQQQLLQQQLATTCDDDTTSL
LRDCYLLEEKERLKEEWSLFKEQKRNFERERRNFTEAAIRLGLERKAFEEERASWVKQQF
LNMTTFDHQNSENVKLFSAFSGSSDPDNLIVHSRPRQKKPHSVANGVPACTSKLTKSLPA
SPSSSDFCQTHSCVSEHSSLSVLNITPEEAKPNEVGRESMDQKWSVVSRPSSREGCYSGC
SPAHAGSRGERDDFP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggatgactgttacagatccagttctgtgtacagaaaacaaaaatctctct
caatatacctcagaaacaaagatgtctccatcaagtttatactcccagcaagtactgtgc
tcctccatacctttatcaaaagccgtgcatggtgattttagtgccttctgcacaggagag
aacattgaacaaagtatctcatatcttgatcaggagctgaccaccttcggttttccttcc
ttatatgaagaatccaaaagtaaagagacaaagagagaattaaacatagttgctgttctg
aactgtatgagtgagctgcttgtgcgtcagcggaagagcctcctggcccaggaaagtgcg
gagacccagaatctgaagctgggcagcgacatggaccacctgcagagctgctacgccaaa
cttaaggaacagctggagacctccaggcgagagatgatcagtcttcaggagagagacagg
cagctacagtgcaaaaacagaaatctgcatcagcttctgaaaaatgagaaagacgaggta
caaaaattacaaaatatcatagccagccgggctactcagtacaatcatgatgtaaagaga
aaggagcgtgaatacaataagctgaaggaacgcctgcatcagcttgttatgaacaagaag
gataaaaacatagccatggatgtcttaaattatgtgggtcgagctgatggaaaacgaggc
tcgtggaggacggataaaacagaagccaggaatgaagatgaaatgtacaaaattctgctg
aatgactatgaataccgccagaagcagatcctgatggagaacgcagagctgaagaaggtc
ctccagcagatgaagaaggagatgatttctctcctttctcctcaaaagaagaaacccaga
gaaagagcagaggacggcacaggcactgttgttatctcggatatagaagaagatgctggg
gagctgagcagagacagtgtctggggcctttcctgtgatactgtgagagagcagcttaca
aacagcatcaggaaacagtggaggattttgaaaagtcatgtagaaaagcttgataaccaa
gcttcgaaggtacactcagagggccttaatgaagaggacgtcatctcacgacaagaccac
gagcaggagactgagaagctggagctggagattgagcggtgtaaagagatgatccaggct
cagcagcaactccttcagcagcagctggccaccacatgtgatgacgacaccacctcactg
ttgcgagactgttatttgctggaagaaaaggaacgccttaaagaagaatggtcccttttt
aaagagcaaaaaaggaattttgagagagaaagacgaaactttacagaagctgctattcgc
ttggggctggagagaaaggcgtttgaagaagagcgagccagctgggtaaagcagcagttt
ttaaacatgacgacctttgaccaccagaactcagaaaatgtgaaacttttcagtgccttc
tcaggaagttctgatccagacaatcttatagtccactcacggccacggcaaaagaagcca
catagtgtggcgaatggggtgccagcttgcacatcaaaactgactaaatctcttcctgct
tcaccttcttcttcagacttttgccaaacacattcatgtgtgtctgaacacagttccctc
agtgtgctgaacataactcctgaagaagctaaaccaaacgaggttggaagagaaagtatg
gatcagaagtggagcgtggtgtcaaggcccagttcgagggagggttgctacagtggctgc
tcgccagcacacgctggctctcgcggagaacgggacgacttcccatag
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