Arvicanthis niloticus (African grass rat): 117706716
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Entry
117706716 CDS
T08817
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117706716 (Exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117706716 (Exosc9)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117706716 (Exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117706716
NCBI-ProteinID:
XP_034355688
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All DBs
Position
4:21720731..21730917
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AA seq
437 aa
AA seq
DB search
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRITFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEITLYPPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGT
MLLKEQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIANQRITAFKMEK
APIDTSNIEEKAEEIIAEAEPPPEVVSKPVLWTPGTAQIGEGIENSWGDLEDSEKEEEDE
GGIDEAVILDDAKMDTGEVSDIGSQGAPIVLSDSEEEEMIILEPEKNPKKIRAQTNTNQK
ATSKSQGKRRKKKRTAN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacgccgctctccaactgcgaacgccgtttcctgctccgcgcaattgaggag
aagaagcggctggatggcagacaaacctatgattacaggaacatcaggatcacattcgga
acggattatggatgctgtattgtagaactggggaaaacaagagtccttggacaggtttcc
tgtgaacttgtttctccaaaactcaatagggcaacagaaggtatccttttttttaacctt
gagctttctcagatggctgctccagcttttgaacctggcagacagtcagatctcttggtg
aagctgaaccgactcttggaaaggtgtctaagaaattcaaaatgtatagacactgaatct
ctctgtgttgtcgcaggtgaaaaggtttggcagatccgtgtagacctacatttattaaat
catgatggaaatattattgatgctgctagcattgctgcaattgtagccttgtgtcacttc
cgaagacctgatgtctctgtccaaggagaggaaataacactgtatccccccgaggagcgt
gaccctgtcccactgagcattcaccatatgcccatttgtgtcagttttgctttcttccag
caaggaacatatttattggtggaccccaatgaacgtgaagaacgagtaatggatggtttg
ctggtgattgccatgaataagcaccgagaaatttgcactatccagtctagtggtgggacg
atgctgctcaaagagcaggttttcagatgcagtaaaatagctggtgtgaaagtagcagag
atcacagagctaatacagaaagctctggaaaatgaccagagagttaggaaagaaggtgga
aaatttggctttgcagagtctatagcaaatcagagaatcacagcatttaaaatggagaag
gcccctattgacacttccaacatagaggagaaagcagaagaaattatcgctgaagccgaa
cctcctccagaagttgtttctaaacctgtgctgtggactcctggaactgcccagattgga
gaaggaatagaaaactcctggggtgaccttgaagattctgagaaggaagaggaggatgaa
ggtggcattgatgaagctgtcattcttgatgatgcaaagatggacactggagaagtttct
gatattgggagccaaggtgcccctatagtgctgtcagacagtgaagaagaagaaatgatc
attctggagccagagaagaatccaaagaaaataagagctcagaccaatacaaaccagaag
gcaacaagtaaaagtcaagggaaaaggaggaaaaagaagagaactgctaattaa
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